RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 RBKSQ9H477 322 aa6.08□□□□□ -1.44
DNMT1-219ENST00000589349 FNDC4Q9H6D8 234 aaPredicted RBP6.08□□□□□ -1.44
DNMT1-219ENST00000589349 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 A0A0B4J2A0 478 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 PIGBOS1A0A0B4J2F0 54 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 CA1P00915 261 aaPredicted RBP6.07□□□□□ -1.44
DNMT1-219ENST00000589349 IL4P05112 153 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 HOXB5P09067 269 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 ZNF688P0C7X2 276 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 P0C879 139 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 RD3LP0DJH9 198 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 P2RY1P47900 373 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 RAB11AP62491 216 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 DHRS2Q13268 280 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 C2orf83Q53S99 150 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 LYG2Q86SG7 212 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 CENPSQ8N2Z9 138 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 TMEM217Q8N7C4 229 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 RNASEH2CQ8TDP1 164 aaKnown RBP6.07□□□□□ -1.44
DNMT1-219ENST00000589349 IL22RA2Q969J5 263 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 OR10C1Q96KK4 312 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 MAP6D1Q9H9H5 199 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 MRPL36Q9P0J6 103 aaKnown RBP6.07□□□□□ -1.44
DNMT1-219ENST00000589349 SHPKQ9UHJ6 478 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 TMEM56-RWDD3S4R434 201 aa6.07□□□□□ -1.44
DNMT1-219ENST00000589349 KIR2DL5BA0A0G2JN68 375 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 KIR2DL5BA0A0G2JPC4 375 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 CENPXA8MT69 81 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 INS-IGF2F8WCM5 200 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 WRBO00258 174 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 MED6O75586 246 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 RPP30P78346 268 aaKnown RBP6.06□□□□□ -1.44
DNMT1-219ENST00000589349 TNFRSF9Q07011 255 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 OR2F1Q13607 317 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 TMEM128Q5BJH2 165 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 ACTL10Q5JWF8 245 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 PRSS54Q6PEW0 395 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 KIR2DL5AQ8N109 375 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 KIR2DL5BQ8NHK3 375 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 RARRES2Q99969 163 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 MAGT1Q9H0U3 335 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 FBXL17Q9UF56 701 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 U3KQ87 197 aa6.06□□□□□ -1.44
DNMT1-219ENST00000589349 LCE6AA0A183 80 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 SMCO3A2RU48 225 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 HELTA6NFD8 242 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 KNCNA6PVL3 124 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 DEFB4AO15263 64 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 LY6G6CO95867 125 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 IFNA21P01568 189 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 FABP1P07148 127 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 LYZP61626 148 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 PSMG4Q5JS54 123 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 C9orf47Q6ZRZ4 202 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 OR51G1Q8NGK1 321 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 OR11H2Q8NH07 326 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 RNF183Q96D59 192 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 LINC00052Q96N35 136 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 SLC25A21Q9BQT8 299 aaPredicted RBP6.05□□□□□ -1.44
DNMT1-219ENST00000589349 VSIRQ9H7M9 311 aa6.05□□□□□ -1.44
DNMT1-219ENST00000589349 SFT2D2O95562 160 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 IGKV1-17P01599 117 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 IGLC1P0CG04 106 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 CRYBB3P26998 211 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 AP2S1P53680 142 aaPredicted RBP6.04□□□□□ -1.44
DNMT1-219ENST00000589349 YPEL3P61236 119 aaPredicted RBP6.04□□□□□ -1.44
DNMT1-219ENST00000589349 SNRPD3P62318 126 aaKnown RBP6.04□□□□□ -1.44
DNMT1-219ENST00000589349 SUPT4H1P63272 117 aaKnown RBP6.04□□□□□ -1.44
DNMT1-219ENST00000589349 AKR1C1Q04828 323 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 PPP1R1AQ13522 171 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 NMSQ5H8A3 153 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 SPANXN5Q5MJ07 72 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 FAM24BQ8N5W8 94 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 COQ8AQ8NI60 647 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 ZNF414Q96IQ9 312 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 SOSTQ9BQB4 213 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 HSPB7Q9UBY9 170 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 TP53TG1Q9Y2A0 90 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 KLK5Q9Y337 293 aaPredicted RBP6.04□□□□□ -1.44
DNMT1-219ENST00000589349 V9GYH0 126 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 TENM3Q9P273 2699 aa6.04□□□□□ -1.44
DNMT1-219ENST00000589349 SNRPGP15A8MWD9 76 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 H3BP45 60 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 IGKV3-20P01619 116 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 USF2Q15853 346 aaPredicted RBP6.03□□□□□ -1.44
DNMT1-219ENST00000589349 ZNF79Q15937 498 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 BSXQ3C1V8 233 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 GGNBP1Q5YKI7 109 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 SIGLEC15Q6ZMC9 328 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 CCDC190Q86UF4 302 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 CIB3Q96Q77 187 aaPredicted RBP6.03□□□□□ -1.44
DNMT1-219ENST00000589349 CLEC5AQ9NY25 188 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 GSKIPQ9P0R6 139 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 TMED3Q9Y3Q3 217 aa6.03□□□□□ -1.44
DNMT1-219ENST00000589349 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
DNMT1-219ENST00000589349 TRAV2A0A0B4J234 112 aa6.02□□□□□ -1.45
DNMT1-219ENST00000589349 DUXBA0A1W2PPF3 345 aa6.02□□□□□ -1.45
DNMT1-219ENST00000589349 NUPR2A6NF83 97 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms