RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 KLK15Q9H2R5 256 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 TECRQ9NZ01 308 aaKnown RBP21.5■■□□□ 1.03
CCM2-218ENST00000541586 LOC102723971A0A1B0GUV8 181 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 SCGB2A1O75556 95 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 CLEC3BP05452 202 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 BCL2P10415 239 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 PF4V1P10720 104 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 ICAM4Q14773 271 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 IFNA1P01562 189 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 ADMP35318 185 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 PSMB3P49720 205 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 LCNL1Q6ZST4 164 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 LINC00305Q7Z4B0 112 aa21.49■■□□□ 1.03
CCM2-218ENST00000541586 NUPL2O15504 423 aaKnown RBP21.48■■□□□ 1.03
CCM2-218ENST00000541586 C8orf88P0DMB2 117 aa21.48■■□□□ 1.03
CCM2-218ENST00000541586 KRTAP10-3P60369 221 aa21.48■■□□□ 1.03
CCM2-218ENST00000541586 TEX38Q6PEX7 206 aa21.48■■□□□ 1.03
CCM2-218ENST00000541586 CLEC19AQ6UXS0 136 aa21.48■■□□□ 1.03
CCM2-218ENST00000541586 GAR1Q9NY12 217 aaKnown RBP21.48■■□□□ 1.03
CCM2-218ENST00000541586 TRAV5A0A0B4J249 113 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 IGHG4P01861 327 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 TAS2R45P59539 299 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 KHDC3LQ587J8 217 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 ZNF491Q8N8L2 437 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 RXFP4Q8TDU9 374 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 Q8WTZ3 238 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 WFDC12Q8WWY7 111 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 USMG5Q96IX5 58 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 SMDT1Q9H4I9 107 aa21.47■■□□□ 1.03
CCM2-218ENST00000541586 CD28P10747 220 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 GCHFRP30047 84 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 C3orf56Q8N813 242 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 OR4X2Q8NGF9 303 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 FAM167A-AS1Q96KT0 104 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 SLC25A2Q9BXI2 301 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 MANBALQ9NQG1 85 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 WI2-2373I1.2A0A1W2PRP0 233 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 OR2C1O95371 312 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 IL4P05112 153 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 SFTA3P0C7M3 94 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 PPT1P50897 306 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 RNF125Q96EQ8 232 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 ZNF503Q96F45 646 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 MRPL27Q9P0M9 148 aaKnown RBP21.46■■□□□ 1.03
CCM2-218ENST00000541586 HIGD1AQ9Y241 93 aa21.46■■□□□ 1.03
CCM2-218ENST00000541586 ADCYAP1P18509 176 aa21.45■■□□□ 1.02
CCM2-218ENST00000541586 RAB9AP51151 201 aa21.45■■□□□ 1.02
CCM2-218ENST00000541586 PQLC2Q6ZP29 291 aa21.45■■□□□ 1.02
CCM2-218ENST00000541586 WIPF2Q8TF74 440 aaPredicted RBP21.45■■□□□ 1.02
CCM2-218ENST00000541586 ATP6V0BQ99437 205 aa21.45■■□□□ 1.02
CCM2-218ENST00000541586 VAX2Q9UIW0 290 aa21.45■■□□□ 1.02
CCM2-218ENST00000541586 OR7C2O60412 319 aa21.44■■□□□ 1.02
CCM2-218ENST00000541586 PSMB8P28062 276 aa21.44■■□□□ 1.02
CCM2-218ENST00000541586 KHDC1LQ5JSQ8 128 aa21.44■■□□□ 1.02
CCM2-218ENST00000541586 TGOLN2O43493 480 aa21.43■■□□□ 1.02
CCM2-218ENST00000541586 HSPB1P04792 205 aaKnown RBP21.43■■□□□ 1.02
CCM2-218ENST00000541586 SLC35B3Q9H1N7 401 aa21.43■■□□□ 1.02
CCM2-218ENST00000541586 PAGE4O60829 102 aa21.43■■□□□ 1.02
CCM2-218ENST00000541586 TCTEX1D4Q5JR98 221 aa21.43■■□□□ 1.02
CCM2-218ENST00000541586 ZNF414Q96IQ9 312 aa21.43■■□□□ 1.02
CCM2-218ENST00000541586 PUS1Q9Y606 427 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCM2-218ENST00000541586 RPLP1P05386 114 aaKnown RBP21.42■■□□□ 1.02
CCM2-218ENST00000541586 USF2Q15853 346 aaPredicted RBP21.42■■□□□ 1.02
CCM2-218ENST00000541586 GNB4Q9HAV0 340 aa21.42■■□□□ 1.02
CCM2-218ENST00000541586 IGHV3-35A0A0C4DH35 117 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 A0A0G2JLM5 398 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 F8W036 122 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 ELANEP08246 267 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 SRP19P09132 144 aaKnown RBP21.41■■□□□ 1.02
CCM2-218ENST00000541586 TAGLN2P37802 199 aaKnown RBP21.41■■□□□ 1.02
CCM2-218ENST00000541586 UBE2G2P60604 165 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 FOXE3Q13461 319 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 ZNF600Q6ZNG1 722 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 SLC25A39Q9BZJ4 359 aaPredicted RBP21.41■■□□□ 1.02
CCM2-218ENST00000541586 TENM1Q9UKZ4 2725 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 IGHV3-11P01762 117 aa21.41■■□□□ 1.02
CCM2-218ENST00000541586 MEF2BQ02080 365 aaPredicted RBP21.41■■□□□ 1.02
CCM2-218ENST00000541586 CITED2Q99967 270 aaPredicted RBP21.41■■□□□ 1.02
CCM2-218ENST00000541586 OR10J4P0C629 311 aa21.4■■□□□ 1.02
CCM2-218ENST00000541586 C10orf91Q5T1B1 145 aa21.4■■□□□ 1.02
CCM2-218ENST00000541586 LEMD1Q68G75 181 aa21.4■■□□□ 1.02
CCM2-218ENST00000541586 SEC11CQ9BY50 192 aa21.4■■□□□ 1.02
CCM2-218ENST00000541586 TMEM167BQ9NRX6 74 aa21.4■■□□□ 1.02
CCM2-218ENST00000541586 PPP5D1E7EU14 171 aa21.39■■□□□ 1.01
CCM2-218ENST00000541586 CD81P60033 236 aa21.39■■□□□ 1.01
CCM2-218ENST00000541586 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.38■■□□□ 1.01
CCM2-218ENST00000541586 A0A1W2PRX2 142 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 PYYP10082 97 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 SUN5Q8TC36 379 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 PAXXQ9BUH6 204 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 ZNF747Q9BV97 191 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 OR51M1Q9H341 326 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 APOC3P02656 99 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 ZNF343Q6P1L6 599 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 TOMM20LQ6UXN7 152 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 CYB561D1Q8N8Q1 229 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 SHANK2-AS3Q9BTD1 123 aa21.38■■□□□ 1.01
CCM2-218ENST00000541586 H3BRN7 92 aa21.37■■□□□ 1.01
CCM2-218ENST00000541586 TRBV12-3P01733 135 aa21.37■■□□□ 1.01
CCM2-218ENST00000541586 ARL3P36405 182 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms