RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	TRAPPC8	Q9Y2L5	1435 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	IGHV3-64	A0A075B6Q5	118 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRAV7	A0A075B6U4	112 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRAV36DV7	A0A075B6V5	113 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961		A0A087X0T9	212 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRAV5	A0A0B4J249	113 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	IGHV1-18	A0A0C4DH31	117 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	IGKV1-9	A0A0C4DH69	117 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRBV7-6	A0A0J9YX20	115 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRDV1	A0A1B0GX56	115 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961		H7C2G1	150 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961		J3KT08	172 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961		M0R378	163 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TAX1BP3	O14907	124 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	DEGS1	O15121	323 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	CYB5B	O43169	146 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TCL1B	O95988	128 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRGC2	P03986	189 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	DBI	P07108	87 aa	Known RBP	0.84	□□□□□ -2.27
RDX-215	ENST00000533961	SCT	P09683	121 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TRGC1	P0CF51	173 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	SMIM17	P0DL12	118 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	SRI	P30626	198 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	RNASE4	P34096	147 aa	Known RBP	0.84	□□□□□ -2.27
RDX-215	ENST00000533961	FXYD2	P54710	66 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	DEFA3	P59666	94 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	KISS1	Q15726	138 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	CCDC153	Q494R4	210 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	CCDC58	Q4VC31	144 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	MORN2	Q502X0	79 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	FAM27B	Q5VT28	67 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	LYZL1	Q6UWQ5	148 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	MIR17HG	Q75NE6	70 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	PHF5A	Q7RTV0	110 aa	Known RBP	0.84	□□□□□ -2.27
RDX-215	ENST00000533961	BPIFA4P	Q86YQ2	179 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	ST6GALNAC3	Q8NDV1	305 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	PFN4	Q8NHR9	129 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	GRPEL2	Q8TAA5	225 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	C10orf105	Q8TEF2	133 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	MBD3L1	Q8WWY6	194 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	SCGB3A1	Q96QR1	104 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	GPX7	Q96SL4	187 aa	Predicted RBP	0.84	□□□□□ -2.27
RDX-215	ENST00000533961	TPT1P8	Q9HAU6	139 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	SLC39A9	Q9NUM3	307 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	GSKIP	Q9P0R6	139 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	EPDR1	Q9UM22	224 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	MED31	Q9Y3C7	131 aa		0.84	□□□□□ -2.27
RDX-215	ENST00000533961	CPAMD8	Q8IZJ3	1885 aa		0.84	□□□□□ -2.28
RDX-215	ENST00000533961	MDC1	Q14676	2089 aa	Known RBP	0.84	□□□□□ -2.28
RDX-215	ENST00000533961	MYH10	P35580	1976 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	RIC1	Q4ADV7	1423 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	SMARCA4	P51532	1647 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	NUP98	P52948	1817 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	TRGV10	A0A0A0MS01	117 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961		A0A0D9SG52	128 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	C7orf71	A4D174	169 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	TMEM189	A5PLL7	270 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	CLDN25	C9JDP6	229 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	NDUFA2	O43678	99 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	BANF1	O75531	89 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	CRP	P02741	224 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	ANG	P03950	147 aa	Known RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	UBB	P0CG47	229 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	RPL7	P18124	248 aa	Known RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	RPS3	P23396	243 aa	Known RBP eCLIP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	SDC4	P31431	198 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	SRP14	P37108	136 aa	Known RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	EVX1	P49640	407 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	PSPH	P78330	225 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	EIF3I	Q13347	325 aa	Known RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	OR8B8	Q15620	311 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	RTL8B	Q17RB0	113 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	SMIM21	Q3B7S5	101 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	BRMS1L	Q5PSV4	323 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	BCL2L15	Q5TBC7	163 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	FKBP1C	Q5VVH2	108 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	C1orf140	Q5VVS0	124 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	C22orf39	Q6P5X5	142 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	C7orf65	Q6ZTY9	151 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	DEFB128	Q7Z7B8	93 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	HIST3H2BB	Q8N257	126 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	RPP25L	Q8N5L8	163 aa	Known RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	SIGLECL1	Q8N7X8	197 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	LZIC	Q8WZA0	190 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	CARD19	Q96LW7	228 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	SLC25A21	Q9BQT8	299 aa	Predicted RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	YIPF3	Q9GZM5	350 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	CST9L	Q9H4G1	147 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	TMEM138	Q9NPI0	162 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	NHP2	Q9NX24	153 aa	Known RBP	0.83	□□□□□ -2.28
RDX-215	ENST00000533961	MED11	Q9P086	117 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	CKLF	Q9UBR5	152 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	PCTP	Q9UKL6	214 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	GREB1	Q4ZG55	1949 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	PTPRB	P23467	1997 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	EML6	Q6ZMW3	1958 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	STRC	Q7RTU9	1775 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	BICRA	Q9NZM4	1560 aa		0.83	□□□□□ -2.28
RDX-215	ENST00000533961	OVOS2	A0A0G2JMS6	1433 aa		0.82	□□□□□ -2.28
RDX-215	ENST00000533961	FER1L6	Q2WGJ9	1857 aa		0.82	□□□□□ -2.28

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms