RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 GAPTQ8N292 157 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 OR10W1Q8NGF6 305 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 OR4P4Q8NGL7 312 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 KIR2DL5BQ8NHK3 375 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 MRPL30Q8TCC3 161 aaKnown RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 LGALS14Q8TCE9 139 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 ZNF418Q8TF45 676 aaPredicted RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 FAM3DQ96BQ1 224 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 MRPS24Q96EL2 167 aaKnown RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 KCTD7Q96MP8 289 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 TMEM56Q96MV1 263 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SULT4A1Q9BR01 284 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 PDCD10Q9BUL8 212 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SUCNR1Q9BXA5 334 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 MRPS26Q9BYN8 205 aaKnown RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 NAA50Q9GZZ1 169 aaKnown RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 LPAR5Q9H1C0 372 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 ZNF286AQ9HBT8 521 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 ZNRD1Q9P1U0 126 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SSR3Q9UNL2 185 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 TMEM56-RWDD3S4R434 201 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 FLNAP21333 2647 aaKnown RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 TACC2O95359 2948 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 DSCAML1Q8TD84 2053 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 ABCA1O95477 2261 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 IGLV11-55A0A075B6I3 123 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 IGHV3-43A0A0B4J1X8 118 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 KBTBD11-OT1A0A1B0GTJ5 212 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 A0A1W2PPE3 182 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 SMCO3A2RU48 225 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 DISC1C4P0D8 188 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 MCRIP1C9JLW8 97 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 C15orf65H3BRN8 121 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CLDN34H7C241 214 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 H7C2Y5 167 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 M0R036 132 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 MFNGO00587 321 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 PEX7O00628 323 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 SOCS1O15524 211 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 ORC5O43913 435 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 SLC22A5O76082 557 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 OR2F2O95006 317 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 GABARAPO95166 117 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 MT-ND4P03905 459 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 ARG1P05089 322 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CD5P06127 495 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 SERPINE2P07093 398 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 METTL15P1P0C7V9 234 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 IGHV3-43DP0DP04 118 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CDK2P24941 298 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CD34P28906 385 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 BLVRBP30043 206 aaPredicted RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 SDC2P34741 201 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CXCL5P42830 114 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CRYBA4P53673 196 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 SUB1P53999 127 aaKnown RBP eCLIP2.43□□□□□ -2.02
CD44-219ENST00000525685 LSM3P62310 102 aaKnown RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 UBA52P62987 128 aaKnown RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 HLA-DRB3P79483 266 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 MXD1Q05195 221 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 RAB31Q13636 194 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 HMGN3Q15651 99 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 LTC4SQ16873 150 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 HLA-DRB5Q30154 266 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CDNFQ49AH0 187 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 IDNKQ5T6J7 187 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 RNASEKQ6P5S7 137 aaKnown RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 HEPN1Q6WQI6 88 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 LINC00299Q6ZSB3 139 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 C6orf201Q7Z4U5 140 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 TMED4Q7Z7H5 227 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 S100A7AQ86SG5 101 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 MRPL52Q86TS9 123 aaKnown RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 Q8N402 240 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 ARRDC1Q8N5I2 433 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 OR11H6Q8NGC7 330 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 OR13D1Q8NGV5 346 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 OR1L1Q8NH94 360 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 UBALD1Q8TB05 177 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 SFT2D1Q8WV19 159 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 PTX4Q96A99 478 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 ARHGAP5-AS1Q96IT6 56 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 TSNAXQ99598 290 aaKnown RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 DCUN1D5Q9BTE7 237 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 TMEM208Q9BTX3 173 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 RSG1Q9BU20 258 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 C20orf24Q9BUV8 137 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 PECRQ9BY49 303 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 TMEM133Q9H2Q1 129 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 MIXL1Q9H2W2 232 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 IDI2-AS1Q9NZ38 188 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 GSKIPQ9P0R6 139 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 AK3Q9UIJ7 227 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 TSSC4Q9Y5U2 329 aaPredicted RBP2.43□□□□□ -2.02
CD44-219ENST00000525685 PEX16Q9Y5Y5 336 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CREBBPQ92793 2442 aa2.43□□□□□ -2.02
CD44-219ENST00000525685 CUBNO60494 3623 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 IGKV2-28A0A075B6P5 120 aa2.42□□□□□ -2.02
CD44-219ENST00000525685 A0A096LNJ9 63 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms