RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 UBE2G2P60604 165 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 ZNF343Q6P1L6 599 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 SLC7A5P1Q8MH63 180 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 NARS2Q96I59 477 aaKnown RBP7.2□□□□□ -1.26
SDCBP-212ENST00000523483 TOMM40O96008 361 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 LGALS1P09382 135 aaKnown RBP7.2□□□□□ -1.26
SDCBP-212ENST00000523483 OR1L4Q8NGR5 311 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 BLNKQ8WV28 456 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 PFDN5Q99471 154 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 TXN2Q99757 166 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 GNG13Q9P2W3 67 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 HOXD3P31249 432 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-212ENST00000523483 PROK1P58294 105 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 ZNF726P1Q15940 193 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 HAGHQ16775 308 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 TM4SF20Q53R12 229 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 OR8I2Q8N0Y5 310 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 COMMD1Q8N668 190 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 PARD6GQ9BYG4 376 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-212ENST00000523483 PYYP10082 97 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 RAB5CP51148 216 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 BLOC1S1P78537 153 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 SPSB3Q6PJ21 355 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 PATE2Q6UY27 113 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 PRIMA1Q86XR5 153 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 TMEM231Q9H6L2 316 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.19□□□□□ -1.26
SDCBP-212ENST00000523483 NDUFA7O95182 113 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 YPEL3P61236 119 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-212ENST00000523483 FOXL1Q12952 345 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 KRTAP24-1Q3LI83 254 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 FAM106AQ4KMX7 169 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 GATAD1Q8WUU5 269 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 METTL26Q96S19 204 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 EIF5A2Q9GZV4 153 aaKnown RBP7.19□□□□□ -1.26
SDCBP-212ENST00000523483 C16orf95Q9H693 158 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 CTXND1A0A1B0GTU2 59 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 EDN2P20800 178 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 CCL20P78556 96 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 OR1N2Q8NGR9 330 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-212ENST00000523483 PFDN2Q9UHV9 154 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
SDCBP-212ENST00000523483 RGS13O14921 159 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 NPPCP23582 126 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 CDX1P47902 265 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-212ENST00000523483 UBE2L3P68036 154 aaKnown RBP7.18□□□□□ -1.26
SDCBP-212ENST00000523483 CST9LP1Q5W188 147 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 IL34Q6ZMJ4 242 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 TSSC4Q9Y5U2 329 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-212ENST00000523483 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-212ENST00000523483 APOHP02749 345 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-212ENST00000523483 AWAT1Q58HT5 328 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 VWFP04275 2813 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 TAS2R45P59539 299 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 TOR2AQ5JU69 321 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 C19orf24Q9BVV8 132 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 TECRQ9NZ01 308 aaKnown RBP7.18□□□□□ -1.26
SDCBP-212ENST00000523483 RPH3ALQ9UNE2 315 aa7.18□□□□□ -1.26
SDCBP-212ENST00000523483 TMEM89A2RUT3 159 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 PF4P02776 101 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 C8orf88P0DMB2 117 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 FAM209BQ5JX69 171 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 CLLU1Q5K131 121 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 LRRC20Q8TCA0 184 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 ZNF98A6NK75 572 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 LINC01619G3V211 115 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 CCL24O00175 119 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 TFPI2P48307 235 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 KRTAP10-3P60369 221 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 COMMD7Q86VX2 200 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 C3orf56Q8N813 242 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 C4orf3Q8WVX3 66 aa7.17□□□□□ -1.26
SDCBP-212ENST00000523483 I3L521 148 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 ZP3P21754 424 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 WFDC3Q8IUB2 231 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 SAT2Q96F10 170 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-212ENST00000523483 PAXXQ9BUH6 204 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 RANP62826 216 aaKnown RBP7.16□□□□□ -1.26
SDCBP-212ENST00000523483 WFDC12Q8WWY7 111 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 RAX2Q96IS3 184 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 TREM1Q9NP99 234 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 DAZ1Q9NQZ3 744 aaKnown RBP7.16□□□□□ -1.26
SDCBP-212ENST00000523483 NDUFA4O00483 81 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 HBE1P02100 147 aa7.16□□□□□ -1.26
SDCBP-212ENST00000523483 DLX4Q92988 240 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-212ENST00000523483 KHDC3LQ587J8 217 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 RXFP4Q8TDU9 374 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 TMEM190Q8WZ59 177 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 RARRES2Q99969 163 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 ELOVL1Q9BW60 279 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 OR51M1Q9H341 326 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 A0A1B0GUS0 222 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 WI2-2373I1.2A0A1W2PRP0 233 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms