RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 FGF6P10767 208 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 LGALS7P47929 136 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 DUX4L9Q6RFH8 374 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-207ENST00000470763 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 NDFIP1Q9BT67 221 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 TRAV8-1A0A0A6YYK1 113 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 H3BRM9 83 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 FAM106CPP0CH98 169 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 C17orf58Q2M2W7 97 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 FAM106AQ4KMX7 169 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 SPRNQ5BIV9 151 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 PRSS22Q9GZN4 317 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 THYN1Q9P016 225 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 APC2O95996 2303 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 FXYD7P58549 80 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 PLP1P60201 277 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
NPHP4-207ENST00000470763 RBPJQ06330 500 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 MEF2CQ06413 473 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-207ENST00000470763 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 RBMXL3Q8N7X1 1067 aaKnown RBP11.08□□□□□ -0.64
NPHP4-207ENST00000470763 PERPQ96FX8 193 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
NPHP4-207ENST00000470763 SPCS1Q9Y6A9 102 aa11.08□□□□□ -0.64
NPHP4-207ENST00000470763 MEOX1P50221 254 aa11.07□□□□□ -0.64
NPHP4-207ENST00000470763 ASCL2Q99929 193 aa11.07□□□□□ -0.64
NPHP4-207ENST00000470763 COL8A1P27658 744 aa11.07□□□□□ -0.64
NPHP4-207ENST00000470763 MYCNOSP40205 109 aa11.07□□□□□ -0.64
NPHP4-207ENST00000470763 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-207ENST00000470763 OR1L8Q8NGR8 309 aa11.07□□□□□ -0.64
NPHP4-207ENST00000470763 JKAMPQ9P055 326 aa11.07□□□□□ -0.64
NPHP4-207ENST00000470763 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 NTN3O00634 580 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-207ENST00000470763 FAM87AP0C7U9 286 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 C10orf55Q5SWW7 151 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 DHRS13Q6UX07 377 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 OR1L4Q8NGR5 311 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 ADTRPQ96IZ2 230 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 LOXL1Q08397 574 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-207ENST00000470763 GCSAMQ8N6F7 178 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 PPP1R35Q8TAP8 253 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 NPFFR1Q9GZQ6 430 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 ACACAQ13085 2346 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 FBLL1A6NHQ2 334 aaKnown RBP11.06□□□□□ -0.64
NPHP4-207ENST00000470763 FSTL3O95633 263 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 CT45A6P0DMU7 189 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 CT45A5P0DMU8 189 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 CT45A7P0DMV0 189 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
NPHP4-207ENST00000470763 F11RQ9Y624 299 aaKnown RBP11.06□□□□□ -0.64
NPHP4-207ENST00000470763 SOX21Q9Y651 276 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-207ENST00000470763 INTS1Q8N201 2190 aaKnown RBP11.05□□□□□ -0.64
NPHP4-207ENST00000470763 SRRM5B3KS81 715 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 PPIAL4GP0DN37 164 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 VSTM2AQ8TAG5 236 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 SPENQ96T58 3664 aaKnown RBP11.05□□□□□ -0.64
NPHP4-207ENST00000470763 IGKV1D-37A0A075B6S9 117 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 LOC389332A0A1B0GUA5 103 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 RUSC1-AS1Q66K80 236 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 TMEM108Q6UXF1 575 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
NPHP4-207ENST00000470763 TPPP3Q9BW30 176 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 SPRR3Q9UBC9 169 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 KLF12Q9Y4X4 402 aa11.05□□□□□ -0.64
NPHP4-207ENST00000470763 A0A1W2PPM0 123 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 TCRBV4S1A1TA0A5B7 111 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 LTAP01374 205 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 ARMS2P0C7Q2 107 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 SMAGPQ0VAQ4 97 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 C6orf15Q6UXA7 325 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CNEP1R1Q8N9A8 125 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 A1L4Q6 167 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 ZNF207O43670 478 aaKnown RBP11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CSN1S1P47710 185 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 ERHP84090 104 aaKnown RBP11.04□□□□□ -0.64
NPHP4-207ENST00000470763 MOGAT3Q86VF5 341 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 SVIPQ8NHG7 77 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 KBTBD11-OT1A0A1B0GTJ5 212 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 hADV38S2A0JD32 116 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CECR9P0C854 216 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 HOXC12P31275 282 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 IFI27P40305 119 aaPredicted RBP11.04□□□□□ -0.64
NPHP4-207ENST00000470763 NMUP48645 174 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CACNG7P62955 275 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CR1LQ2VPA4 569 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 CT83Q5H943 113 aa11.04□□□□□ -0.64
NPHP4-207ENST00000470763 PCP2Q8IVA1 136 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms