RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 DEGS1O15121 323 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 HMGN1P05114 100 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 RPL26P61254 145 aaKnown RBP2.15□□□□□ -2.07
TTC3-213ENST00000469939 ZNF345Q14585 488 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 Q6ZTI0 123 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 AAED1Q7RTV5 226 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 LRRC28Q86X40 367 aaPredicted RBP2.15□□□□□ -2.07
TTC3-213ENST00000469939 SLC30A7Q8NEW0 376 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 OR8B3Q8NGG8 313 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 OR2T10Q8NGZ9 312 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 ADAT1Q9BUB4 502 aaKnown RBP2.15□□□□□ -2.07
TTC3-213ENST00000469939 NPCDR1Q9BY65 106 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 BCL2L10Q9HD36 194 aa2.15□□□□□ -2.07
TTC3-213ENST00000469939 RPL26L1Q9UNX3 145 aaKnown RBP2.15□□□□□ -2.07
TTC3-213ENST00000469939 NUP210Q8TEM1 1887 aaPredicted RBP2.15□□□□□ -2.07
TTC3-213ENST00000469939 CCDC180Q9P1Z9 1646 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 TRAV36DV7A0A075B6V5 113 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 ZNF705FA8MVS1 300 aaPredicted RBP2.14□□□□□ -2.07
TTC3-213ENST00000469939 IBA57-AS1B1ANH7 110 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 K7ERJ3 54 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 OVOL1O14753 267 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 GADD45GO95257 159 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 NAPSAO96009 420 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 HLA-EP13747 358 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
TTC3-213ENST00000469939 SLC38A11Q08AI6 406 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 EIF3IQ13347 325 aaKnown RBP2.14□□□□□ -2.07
TTC3-213ENST00000469939 BRMS1LQ5PSV4 323 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 OR4D11Q8NGI4 311 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 BORCS5Q969J3 196 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 TIMM21Q9BVV7 248 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 RASL12Q9NYN1 266 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 NAT8BQ9UHF3 227 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 NCAPD3P42695 1498 aa2.14□□□□□ -2.07
TTC3-213ENST00000469939 STRCQ7RTU9 1775 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 N4BP2Q86UW6 1770 aaPredicted RBP2.13□□□□□ -2.07
TTC3-213ENST00000469939 CPDO75976 1380 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 NUP98P52948 1817 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 TRAV5A0A0B4J249 113 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 A0A1B0GX51 115 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 SDCBPO00560 298 aaPredicted RBP2.13□□□□□ -2.07
TTC3-213ENST00000469939 PMP2P02689 132 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 GTF2A1P52655 376 aaPredicted RBP2.13□□□□□ -2.07
TTC3-213ENST00000469939 PATE2Q6UY27 113 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 ZNF826PQ6ZT77 177 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 C9orf163Q8N9P6 203 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 TMEM229BQ8NBD8 167 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 OR2H1Q9GZK4 316 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 CXCL16Q9H2A7 254 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 COL4A2P08572 1712 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 SBF1O95248 1867 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 SMARCA4P51532 1647 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 NCKAP5O14513 1909 aa2.13□□□□□ -2.07
TTC3-213ENST00000469939 ZFHX2Q9C0A1 2572 aaPredicted RBP2.12□□□□□ -2.07
TTC3-213ENST00000469939 ADGRB3O60242 1522 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 TRAV3A0A0B4J244 114 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 TIMM17BO60830 172 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 CST7O76096 145 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 HBBP68871 147 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 ZNF181Q2M3W8 571 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 EIF5AL1Q6IS14 154 aaKnown RBP2.12□□□□□ -2.07
TTC3-213ENST00000469939 PHF5AQ7RTV0 110 aaKnown RBP2.12□□□□□ -2.07
TTC3-213ENST00000469939 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 ZNF418Q8TF45 676 aaPredicted RBP2.12□□□□□ -2.07
TTC3-213ENST00000469939 LZICQ8WZA0 190 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 FAM107BQ9H098 131 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 HS3ST2Q9Y278 367 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 LHFPL6Q9Y693 200 aa2.12□□□□□ -2.07
TTC3-213ENST00000469939 DIDO1Q9BTC0 2240 aaKnown RBP2.11□□□□□ -2.07
TTC3-213ENST00000469939 PEG3Q9GZU2 1588 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 TRAPPC8Q9Y2L5 1435 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 IGKV3D-11A0A0A0MRZ8 115 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 TRAV1-1A0A0B4J248 108 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 TRGV4A0A0C4DH28 118 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 HIST1H2BKO60814 126 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 LYZL6O75951 148 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 HIST1H2BJP06899 126 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 GPX2P18283 190 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 PSPHP78330 225 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 PSG9Q00887 426 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 MYL5Q02045 173 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 CCDC153Q494R4 210 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 TMEM155Q4W5P6 130 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 Q8IYB0 196 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 TMEM138Q9NPI0 162 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 NHP2Q9NX24 153 aaKnown RBP2.11□□□□□ -2.07
TTC3-213ENST00000469939 TAS2R4Q9NYW5 299 aa2.11□□□□□ -2.07
TTC3-213ENST00000469939 ANKRD31Q8N7Z5 1873 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 BORCS7-ASMTA0A0B4J1R7 106 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 FABP2P12104 132 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 SDC2P34741 201 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 RPL35P42766 123 aaKnown RBP2.1□□□□□ -2.07
TTC3-213ENST00000469939 CKS1BP61024 79 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 ESRGQ1W209 222 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 ZNF714Q96N38 554 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 TCEAL2Q9H3H9 227 aaPredicted RBP2.1□□□□□ -2.07
TTC3-213ENST00000469939 SPANXCQ9NY87 97 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 RP1P56715 2156 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 MYH10P35580 1976 aa2.1□□□□□ -2.07
TTC3-213ENST00000469939 RTEL1-TNFRSF6BF6WH68 1400 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms