RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 SLC25A21Q9BQT8 299 aaPredicted RBP1.13□□□□□ -2.23
GYPB-201ENST00000429670 NUBP2Q9Y5Y2 271 aa1.13□□□□□ -2.23
GYPB-201ENST00000429670 RIMBP3CA6NJZ7 1639 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 RIMBP3BA6NNM3 1639 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 RIMBP3Q9UFD9 1639 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 A0A1W2PRE2 83 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 E7EQ34 232 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 GLRXP35754 106 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 SSR2P43308 183 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 RAB4BP61018 213 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 LTC4SQ16873 150 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.12□□□□□ -2.23
GYPB-201ENST00000429670 ANGPTL5Q86XS5 388 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 Q8N2B8 174 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 FAM24BQ8N5W8 94 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 OR10K1Q8NGX5 313 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 SFT2D1Q8WV19 159 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 ANP32BQ92688 251 aaKnown RBP1.12□□□□□ -2.23
GYPB-201ENST00000429670 ADAT1Q9BUB4 502 aaKnown RBP1.12□□□□□ -2.23
GYPB-201ENST00000429670 NPCDR1Q9BY65 106 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 CPAMD8Q8IZJ3 1885 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 NCAPD3P42695 1498 aa1.12□□□□□ -2.23
GYPB-201ENST00000429670 OTOGLQ3ZCN5 2332 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 NCKAP5O14513 1909 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 GREB1Q4ZG55 1949 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 KIF1BO60333 1816 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 A0A087WSZ3 146 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 TRAV14DV4A0A0A6YYC5 116 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 TRAV1-1A0A0B4J248 108 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 CST8O60676 142 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 TIMM17BO60830 172 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 FAM107AO95990 144 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 MGST1P10620 155 aaKnown RBP1.11□□□□□ -2.23
GYPB-201ENST00000429670 BRS3P32247 399 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 INSL3P51460 131 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 ROMO1P60602 79 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 NUMA1Q14980 2115 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 SNCBQ16143 134 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 RTL8BQ17RB0 113 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 PATE2Q6UY27 113 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 PRR15Q8IV56 129 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 Q8IYB0 196 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 OR4C6Q8NH72 309 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 PPTC7Q8NI37 304 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 ZNF418Q8TF45 676 aaPredicted RBP1.11□□□□□ -2.23
GYPB-201ENST00000429670 CCDC32Q9BV29 185 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 OR52A1Q9UKL2 312 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 LY96Q9Y6Y9 160 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 BRWD1Q9NSI6 2320 aa1.11□□□□□ -2.23
GYPB-201ENST00000429670 ZCCHC11Q5TAX3 1644 aaKnown RBP1.11□□□□□ -2.23
GYPB-201ENST00000429670 ARHGEF28Q8N1W1 1705 aaKnown RBP1.1□□□□□ -2.23
GYPB-201ENST00000429670 E7EUB6 86 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 C17orf112F2Z3M2 114 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 H0YJX3 145 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 H3BQV1 296 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 HYPMO75409 117 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 GADD45GO95257 159 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 IFNA4P05014 189 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 OR10J4P0C629 311 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 NBEAP1P0C6P0 100 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 DSCR4P56555 118 aaPredicted RBP1.1□□□□□ -2.23
GYPB-201ENST00000429670 CNBPP62633 177 aaKnown RBP1.1□□□□□ -2.23
GYPB-201ENST00000429670 C1orf137Q5JT78 98 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 FKBP1CQ5VVH2 108 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 SOSTDC1Q6X4U4 206 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 TAC4Q86UU9 113 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 LINC00301Q8NCQ3 95 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 SPANXA1Q9NS26 97 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 LAMTOR2Q9Y2Q5 125 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 STRCQ7RTU9 1775 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 PCNX2A6NKB5 2137 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 CAMSAP2Q08AD1 1489 aa1.1□□□□□ -2.23
GYPB-201ENST00000429670 LOC110117498A0A087WWA1 95 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 GNG14A0A1W2PPG7 69 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 PRORSD1PA6NEY8 169 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 M0R2N4 97 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 HIST1H2BKO60814 126 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 HIST1H2BJP06899 126 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 BCL2P10415 239 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 RNASE10Q5GAN6 216 aaKnown RBP1.09□□□□□ -2.23
GYPB-201ENST00000429670 IFT20Q8IY31 132 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 ST6GALNAC3Q8NDV1 305 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 OR5D16Q8NGK9 328 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 OR9Q1Q8NGQ5 310 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 THEM6Q8WUY1 208 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 DYDC1Q8WWB3 177 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 OR2H1Q9GZK4 316 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 C6orf62Q9GZU0 229 aaPredicted RBP1.09□□□□□ -2.23
GYPB-201ENST00000429670 CACYBPQ9HB71 228 aaKnown RBP1.09□□□□□ -2.23
GYPB-201ENST00000429670 MED11Q9P086 117 aa1.09□□□□□ -2.23
GYPB-201ENST00000429670 CHCHD2Q9Y6H1 151 aaPredicted RBP1.09□□□□□ -2.23
GYPB-201ENST00000429670 CCDC88CQ9P219 2028 aa1.09□□□□□ -2.24
GYPB-201ENST00000429670 SBF1O95248 1867 aa1.09□□□□□ -2.24
GYPB-201ENST00000429670 ZNF106Q9H2Y7 1883 aaKnown RBP1.09□□□□□ -2.24
GYPB-201ENST00000429670 PTPRBP23467 1997 aa1.08□□□□□ -2.24
GYPB-201ENST00000429670 KDM6AO15550 1401 aaPredicted RBP1.08□□□□□ -2.24
GYPB-201ENST00000429670 TNS3Q68CZ2 1445 aa1.08□□□□□ -2.24
GYPB-201ENST00000429670 CD109Q6YHK3 1445 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms