RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 C17orf58Q2M2W7 97 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 TMEM183AQ8IXX5 376 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 SLC25A39Q9BZJ4 359 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 C10orf105Q8TEF2 133 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 WDR83OSQ9Y284 106 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 DEFB131AP59861 70 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 PSMB2P49721 201 aa13.81□□□□□ -0.2
SMARCA4-203ENST00000429416 OR4D5Q8NGN0 318 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 CTSZQ9UBR2 303 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 A0A1W2PPI3 338 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 IGFL4Q6B9Z1 124 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 VPREB3Q9UKI3 123 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 PSG8Q9UQ74 426 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 CHD8Q9HCK8 2581 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 ZNF98A6NK75 572 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 E9PQ18 207 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 TMEM250H0YL14 139 aa13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-203ENST00000429416 TRGV11A0A075B6L2 103 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 MLANAQ16655 118 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 C1QTNF4Q9BXJ3 329 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 EPDR1Q9UM22 224 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 SLC17A3O00476 420 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 BTCP35070 178 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 MRAPQ8TCY5 172 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 IGHV4-38-2P0DP08 117 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 FOXA3P55318 350 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 LCN12Q6JVE5 192 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 KAAG1Q9UBP8 84 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 MRPL18Q9H0U6 180 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 IFT22Q9H7X7 185 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 SPRNQ5BIV9 151 aa13.79□□□□□ -0.2
SMARCA4-203ENST00000429416 PLCE1Q9P212 2302 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 TRGV1A0A0A0MS02 117 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 HBBP68871 147 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 EXOC3-AS1Q8N2X6 119 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 RNF126Q9BV68 326 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 IGHV3-53P01767 116 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 NMUP48645 174 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 SRSF4Q08170 494 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 DIAPH2-AS1Q14236 149 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 TRAV12-3A0A0B4J271 114 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 IGKV1-6A0A0C4DH72 117 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 NPIPB5A8MRT5 1133 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 C19orf84I3L1E1 186 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 NDUFB8O95169 186 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 MEIG1Q5JSS6 88 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 OR9G4Q8NGQ1 327 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 LIME1Q9H400 295 aa13.78□□□□□ -0.2
SMARCA4-203ENST00000429416 FBLL1A6NHQ2 334 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 SRIP30626 198 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 PAPPA-AS1Q5QFB9 102 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 LRTM2Q8N967 370 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 TRGV9Q99603 122 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 A0A1B0GUT8 65 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 PPP1R17O96001 155 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 PRSS2P07478 247 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 IGFBPL1Q8WX77 278 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 GGTLC1Q9BX51 225 aa13.77□□□□□ -0.2
SMARCA4-203ENST00000429416 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 RPP21Q9H633 154 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 DEFB130BP0DP73 79 aa13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 DEFB130AP0DP74 79 aa13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 C9orf139Q6ZV77 190 aa13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 MCRIP2Q9BUT9 160 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 RNF222A6NCQ9 220 aa13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 ITGB1BP1O14713 200 aa13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 HOXB4P17483 251 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-203ENST00000429416 ABCA2Q9BZC7 2435 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 H0YIZ8 118 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 RNF138Q8WVD3 245 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 RCHY1Q96PM5 261 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 TOMM7Q9P0U1 55 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 LINC00862A6NCI5 91 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 CRPP02741 224 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 NMSQ5H8A3 153 aa13.76□□□□□ -0.21
SMARCA4-203ENST00000429416 Q6ZS49 121 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 VGLL1Q99990 258 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 VAMP3Q15836 100 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 ZNF506Q5JVG8 444 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 LY6G6FQ5SQ64 297 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 RNASE2P10153 161 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 ZNF833PQ6ZTB9 187 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 DTX2Q86UW9 622 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 CHCHD5Q9BSY4 110 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 IGHV3-73A0A0B4J1V6 119 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 TMEM136Q6ZRR5 245 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 XCL2Q9UBD3 114 aa13.75□□□□□ -0.21
SMARCA4-203ENST00000429416 TCTEX1D4Q5JR98 221 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 SPATA31B1PQ5VZV4 182 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 TAS2R60P59551 318 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 OR4C5Q8NGB2 326 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 PRELID3AQ96N28 172 aa13.74□□□□□ -0.21
SMARCA4-203ENST00000429416 INSP01308 110 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms