RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 SH3BGRL2Q9UJC5 107 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 TCTAP57738 103 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 VWA1Q6PCB0 445 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 DEFB108BQ8NET1 73 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 OR1B1Q8NGR6 318 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 H1FXQ92522 213 aaKnown RBP7.19□□□□□ -1.26
SIK3-202ENST00000413553 HARBI1Q96MB7 349 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 NAA38Q9BRA0 125 aaKnown RBP7.19□□□□□ -1.26
SIK3-202ENST00000413553 MS4A6AQ9H2W1 248 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 ZNF835Q9Y2P0 537 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 ZZEF1O43149 2961 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 SPRY3O43610 288 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 CT45A6P0DMU7 189 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 CT45A5P0DMU8 189 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 CT45A7P0DMV0 189 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 RBPMS2Q6ZRY4 209 aaKnown RBP7.19□□□□□ -1.26
SIK3-202ENST00000413553 CACNG8Q8WXS5 425 aa7.19□□□□□ -1.26
SIK3-202ENST00000413553 PLXNB1O43157 2135 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.18□□□□□ -1.26
SIK3-202ENST00000413553 TCRBV4S1A1TA0A5B7 111 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 FAM231BA6NCW3 169 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 IGLC1P0CG04 106 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 ATP5IP56385 69 aaPredicted RBP7.18□□□□□ -1.26
SIK3-202ENST00000413553 FOXE3Q13461 319 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 TEX45Q8NA69 505 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 SOX21Q9Y651 276 aaPredicted RBP7.18□□□□□ -1.26
SIK3-202ENST00000413553 PRRG2O14669 202 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 COL8A1P27658 744 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 C10orf55Q5SWW7 151 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 GTF2H5Q6ZYL4 71 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 PROCRQ9UNN8 238 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 SSUH2Q9Y2M2 353 aa7.18□□□□□ -1.26
SIK3-202ENST00000413553 E7EUB6 86 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 CGB3P0DN86 165 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 CGB7P0DN87 165 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 COX8AP10176 69 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 KIR2DL2P43627 348 aaPredicted RBP7.17□□□□□ -1.26
SIK3-202ENST00000413553 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 ATRXP46100 2492 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 IGHV1-18A0A0C4DH31 117 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 H3BUT2 72 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 APOHP02749 345 aaPredicted RBP7.17□□□□□ -1.26
SIK3-202ENST00000413553 NBEAP1P0C6P0 100 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 MBNL2Q5VZF2 373 aaKnown RBP7.17□□□□□ -1.26
SIK3-202ENST00000413553 GFRALQ6UXV0 394 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 FER1L6-AS1Q8NA97 138 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 ITLN1Q8WWA0 313 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 PERPQ96FX8 193 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 NDFIP1Q9BT67 221 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 AP5S1Q9NUS5 200 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 DKK4Q9UBT3 224 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 COL6A6A6NMZ7 2263 aa7.17□□□□□ -1.26
SIK3-202ENST00000413553 SEC11AP67812 179 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 LINC01545Q5VT33 79 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 OR8A1Q8NGG7 326 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 FMC1Q96HJ9 113 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
SIK3-202ENST00000413553 NDUFA4L2Q9NRX3 87 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
SIK3-202ENST00000413553 HILPDAQ9Y5L2 63 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 MYCNOSP40205 109 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 WT1-ASQ06250 92 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 CT83Q5H943 113 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 FA2HQ7L5A8 372 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 WFDC8Q8IUA0 241 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 CIARTQ8N365 385 aaPredicted RBP7.16□□□□□ -1.26
SIK3-202ENST00000413553 RPRMLQ8N4K4 120 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 C5orf17Q8NAS9 161 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 TMEM116Q8NCL8 245 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 RAB37Q96AX2 223 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 MLST8Q9BVC4 326 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 PRSS22Q9GZN4 317 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 IGKV1D-37A0A075B6S9 117 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 hADV38S2A0JD32 116 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 C19orf71A6NCJ1 209 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 NCR2O95944 276 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 SUB1P53999 127 aaKnown RBP eCLIP7.16□□□□□ -1.26
SIK3-202ENST00000413553 MSMPQ1L6U9 139 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 C1orf185Q5T7R7 199 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 FAM216BQ8N7L0 139 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 STXBP6Q8NFX7 210 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 PRSS3P2Q8NHM4 247 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 FLYWCH2Q96CP2 140 aaKnown RBP7.16□□□□□ -1.26
SIK3-202ENST00000413553 CCL13Q99616 98 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 TPPP3Q9BW30 176 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 Q9H3A6 140 aa7.16□□□□□ -1.26
SIK3-202ENST00000413553 IGHV3-21A0A0B4J1V1 117 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 A6NDN8 102 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 LTAP01374 205 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 TCRAP04437 139 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 CSN1S1P47710 185 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 SLC25A48Q6ZT89 311 aaKnown RBP7.15□□□□□ -1.26
SIK3-202ENST00000413553 OSR1Q8TAX0 266 aaPredicted RBP7.15□□□□□ -1.26
SIK3-202ENST00000413553 GFRA4Q9GZZ7 299 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 ZNF492Q9P255 531 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.26
SIK3-202ENST00000413553 PRB4P10163 310 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms