RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 IGHV1-69P01742 117 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 NPSP0C0P6 89 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
GCFC2-202ENST00000409857 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 TBL2Q9Y4P3 447 aaKnown RBP13.44□□□□□ -0.26
GCFC2-202ENST00000409857 ODF3BA8MYP8 253 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 J3QR06 171 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 IGKV1-16P04430 117 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 PMCHP20382 165 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 SUMO1P63165 101 aaKnown RBP13.44□□□□□ -0.26
GCFC2-202ENST00000409857 CX3CL1P78423 397 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 C9orf139Q6ZV77 190 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 PNKDQ8N490 385 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 ZNF596Q8TC21 504 aa13.44□□□□□ -0.26
GCFC2-202ENST00000409857 SRRM4A7MD48 611 aaKnown RBP13.43□□□□□ -0.26
GCFC2-202ENST00000409857 LINC00614P0C842 121 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 IGHV4-38-2P0DP08 117 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 MGST1P10620 155 aaKnown RBP13.43□□□□□ -0.26
GCFC2-202ENST00000409857 BRS3P32247 399 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 DLX1P56177 255 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 KLRD1Q13241 179 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 OR9G1Q8NH87 305 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 M0QZK8 103 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 IGLV2-8P01709 118 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 LINC00311Q8N616 119 aa13.43□□□□□ -0.26
GCFC2-202ENST00000409857 NSD1Q96L73 2696 aaPredicted RBP13.42□□□□□ -0.26
GCFC2-202ENST00000409857 DIRC3C9JPN6 131 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 ITGB1BP1O14713 200 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 COX7A1P24310 79 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 TFPI2P48307 235 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 RAB7AP51149 207 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 PRRX1P54821 245 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 NRN1Q9NPD7 142 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 TMEM167BQ9NRX6 74 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 SERTAD4Q9NUC0 356 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 A0A1W2PS18 150 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 IGLV1-47P01700 117 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 AMTP48728 403 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 SCGB2A2Q13296 93 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 TIGITQ495A1 244 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 Q71RC1 249 aaPredicted RBP13.42□□□□□ -0.26
GCFC2-202ENST00000409857 ZNF439Q8NDP4 499 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 OR10W1Q8NGF6 305 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 PLEKHA3Q9HB20 300 aa13.42□□□□□ -0.26
GCFC2-202ENST00000409857 TRAV5A0A0B4J249 113 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 INAFM1C9JVW0 142 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 NPFFO15130 113 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 SRIP30626 198 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 FAM19A2Q8N3H0 131 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 TECRQ9NZ01 308 aaKnown RBP13.41□□□□□ -0.26
GCFC2-202ENST00000409857 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 ZNF253O75346 499 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 PRB3Q04118 309 aaPredicted RBP13.41□□□□□ -0.26
GCFC2-202ENST00000409857 COTL1Q14019 142 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 ZNF586Q9NXT0 402 aa13.41□□□□□ -0.26
GCFC2-202ENST00000409857 BMPR1BO00238 502 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 IBA57Q5T440 356 aaKnown RBP13.4□□□□□ -0.26
GCFC2-202ENST00000409857 MINOS1Q5TGZ0 78 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 SLC25A48Q6ZT89 311 aaKnown RBP13.4□□□□□ -0.26
GCFC2-202ENST00000409857 OSTCQ9NRP0 149 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 MINOS1-NBL1R4GNA1 71 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 TEX50A0A1B0GTY4 177 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 IL17RELQ6ZVW7 336 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
GCFC2-202ENST00000409857 AMMECR1Q9Y4X0 333 aaPredicted RBP13.4□□□□□ -0.26
GCFC2-202ENST00000409857 ANK3Q12955 4377 aaKnown RBP13.4□□□□□ -0.27
GCFC2-202ENST00000409857 SONP18583 2426 aaKnown RBP13.39□□□□□ -0.27
GCFC2-202ENST00000409857 CRLF1O75462 422 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 PRCDQ00LT1 54 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 NAV3Q8IVL0 2385 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 KCNS1Q96KK3 526 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 IGF2BP2-AS1Q96M15 143 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 IGHV3OR16-10A0A075B7F0 116 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 UPK2O00526 184 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 CT45A6P0DMU7 189 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 CT45A5P0DMU8 189 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 CT45A7P0DMV0 189 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 SAA4P35542 130 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 SPATA45Q537H7 98 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 RUSC1-AS1Q66K80 236 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 WDR73Q6P4I2 378 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 BRD3OSQ6XYD6 125 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 OR2T6Q8NHC8 308 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 PRNDQ9UKY0 176 aa13.39□□□□□ -0.27
GCFC2-202ENST00000409857 ISLRO14498 428 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 SRD5A1P18405 259 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 SSBP2P81877 361 aaPredicted RBP13.38□□□□□ -0.27
GCFC2-202ENST00000409857 MMDQ15546 238 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 PRR31Q5SQ13 230 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 WNT10AQ9GZT5 417 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 BUB1B-PAK6H3BSN5 160 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 MT-ND6P03923 174 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 AMY1AP04745 511 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 OR5G3P0C626 314 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 HTR1DP28221 377 aa13.38□□□□□ -0.27
GCFC2-202ENST00000409857 CTRLP40313 264 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms