RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 HEATR1Q9H583 2144 aaKnown RBP13.27□□□□□ -0.29
ITSN1-209ENST00000399352 COLCA1Q6ZS62 124 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 FAM57AQ8TBR7 257 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 EPOPA6NHQ4 379 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 CRYGSP22914 178 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 NTF4P34130 210 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 AMN1Q8IY45 258 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 MESP1Q9BRJ9 268 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
ITSN1-209ENST00000399352 SCN4AP35499 1836 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 NCOR1O75376 2440 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 MLNRO43193 412 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 SH2D1AO60880 128 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
ITSN1-209ENST00000399352 GAGE2AQ6NT46 116 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
ITSN1-209ENST00000399352 COL18A1P39060 1754 aa13.25□□□□□ -0.29
ITSN1-209ENST00000399352 CADP27708 2225 aa13.25□□□□□ -0.29
ITSN1-209ENST00000399352 TRGV11A0A075B6L2 103 aa13.25□□□□□ -0.29
ITSN1-209ENST00000399352 NEU4Q8WWR8 484 aaPredicted RBP13.25□□□□□ -0.29
ITSN1-209ENST00000399352 PSPNO60542 156 aa13.25□□□□□ -0.29
ITSN1-209ENST00000399352 CACNA1EQ15878 2313 aa13.25□□□□□ -0.29
ITSN1-209ENST00000399352 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 FOXG1P55316 489 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-209ENST00000399352 PAX8Q06710 450 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 PLSCR4Q9NRQ2 329 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 OVOL1O14753 267 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 LY96Q9Y6Y9 160 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 C5orf63A6NC05 138 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 MST1LQ2TV78 715 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 LINC00479Q96M42 142 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 PEMTQ9UBM1 199 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 COL4A1P02462 1669 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 TUBGCP6Q96RT7 1819 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-209ENST00000399352 C20orf144Q9BQM9 153 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 ZNF581Q9P0T4 197 aa13.24□□□□□ -0.29
ITSN1-209ENST00000399352 LINC01549A6NIU2 74 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 ITGB1BP1O14713 200 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 LINC00205P59089 165 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 C9orf153Q5TBE3 101 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 C14orf178Q8N769 122 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-209ENST00000399352 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-209ENST00000399352 MED12Q93074 2177 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
ITSN1-209ENST00000399352 A0A0G2JRQ6 117 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 SPSB3Q6PJ21 355 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 TEX43Q6ZNM6 134 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 MBNL3Q9NUK0 354 aaKnown RBP13.23□□□□□ -0.29
ITSN1-209ENST00000399352 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
ITSN1-209ENST00000399352 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
ITSN1-209ENST00000399352 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
ITSN1-209ENST00000399352 TRAV40A0A0B4J280 105 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 FAM166AQ6J272 317 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 EFNA2O43921 213 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 IGHV2-70P01814 119 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 C3orf36Q3SXR2 165 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 FAM168AQ92567 244 aa13.22□□□□□ -0.29
ITSN1-209ENST00000399352 SRRM4A7MD48 611 aaKnown RBP13.21□□□□□ -0.29
ITSN1-209ENST00000399352 IGHV1-18A0A0C4DH31 117 aa13.21□□□□□ -0.29
ITSN1-209ENST00000399352 LINC00473A8K010 186 aa13.21□□□□□ -0.29
ITSN1-209ENST00000399352 C15orf32Q32M92 178 aa13.21□□□□□ -0.3
ITSN1-209ENST00000399352 DPH3P1Q9H4G8 78 aa13.21□□□□□ -0.3
ITSN1-209ENST00000399352 DOCK9Q9BZ29 2069 aa13.21□□□□□ -0.3
ITSN1-209ENST00000399352 A0A1B0GWJ7 208 aa13.21□□□□□ -0.3
ITSN1-209ENST00000399352 NABP1Q96AH0 204 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 C15orf62A8K5M9 175 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 SPXQ9BT56 116 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 MTCL1Q9Y4B5 1905 aaKnown RBP13.2□□□□□ -0.3
ITSN1-209ENST00000399352 LILRA1O75019 489 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
ITSN1-209ENST00000399352 MLANAQ16655 118 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 ETDBQ3ZM63 59 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 Q6ZRM9 215 aa13.2□□□□□ -0.3
ITSN1-209ENST00000399352 VCYO14598 125 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 LYL1P12980 280 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 NDPQ00604 133 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 ZNF415Q09FC8 603 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 Q0VG73 95 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 TRGV9Q99603 122 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 LRRK1Q38SD2 2015 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 PINLYPA6NC86 204 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 FLVCR1-AS1Q8TAF5 88 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 SP9P0CG40 484 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 VWC2LB2RUY7 222 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
ITSN1-209ENST00000399352 C18orf32Q8TCD1 76 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 RASL10AQ92737 203 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 PFN1P07737 140 aaKnown RBP13.18□□□□□ -0.3
ITSN1-209ENST00000399352 PRSS57Q6UWY2 283 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms