RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ZNF876PQ49A33 203 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 GAS1P54826 345 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 NIT1Q86X76 327 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 C3orf56Q8N813 242 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 USMG5Q96IX5 58 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 FOXL1Q12952 345 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 BMPERQ8N8U9 685 aa14.76□□□□□ -0.05
COL18A1-202ENST00000355480 PNRC2Q9NPJ4 139 aaKnown RBP14.76□□□□□ -0.05
COL18A1-202ENST00000355480 ZNF138P52744 262 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 ZNF474Q6S9Z5 364 aaPredicted RBP14.75□□□□□ -0.05
COL18A1-202ENST00000355480 IGHG3P01860 377 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 LYPD2Q6UXB3 125 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 DEFB104AQ8WTQ1 72 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 C5orf30Q96GV9 206 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 PDCD11Q14690 1871 aaKnown RBP14.75□□□□□ -0.05
COL18A1-202ENST00000355480 C5orf63A6NC05 138 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 DOPEY2Q9Y3R5 2298 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 SSC4DQ8WTU2 575 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 IFI27L1Q96BM0 104 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 UBE2E2Q96LR5 201 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 WNK3Q9BYP7 1800 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 CACNA1DQ01668 2161 aa14.75□□□□□ -0.05
COL18A1-202ENST00000355480 PSCAO43653 123 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 NCR2O95944 276 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 LAGE3Q14657 143 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 MGST2Q99735 147 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 SP5Q6BEB4 398 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-202ENST00000355480 MORN3Q6PF18 240 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-202ENST00000355480 ATP5L2Q7Z4Y8 100 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 CST9LQ9H4G1 147 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 RNF114Q9Y508 228 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 RNF166Q96A37 237 aaPredicted RBP14.74□□□□□ -0.05
COL18A1-202ENST00000355480 SIGLEC9Q9Y336 463 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 IGKV1D-17A0A075B6S4 117 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 B3GALT5-AS1P59052 145 aa14.74□□□□□ -0.05
COL18A1-202ENST00000355480 CHCHD1Q96BP2 118 aaKnown RBP14.74□□□□□ -0.05
COL18A1-202ENST00000355480 SAA4P35542 130 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 LHFPL1Q86WI0 220 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 DOCK6Q96HP0 2047 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 RNF223E7ERA6 249 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 IGKV1-5P01602 117 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 DTX1Q86Y01 620 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 FAM223BA6NKX1 122 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 FAM223AQ8IWN6 122 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 MTURNQ8N3F0 131 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 TRAV8-2A0A0B4J237 113 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 GREB1Q4ZG55 1949 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 TCRAP04437 139 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 OR2K2Q8NGT1 345 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 C1QTNF4Q9BXJ3 329 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 JPT2Q9H910 190 aa14.73□□□□□ -0.05
COL18A1-202ENST00000355480 HOXA3O43365 443 aaPredicted RBP14.72□□□□□ -0.05
COL18A1-202ENST00000355480 TMEM249Q2WGJ8 235 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 Q8TAT8 98 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 C5orf24Q7Z6I8 188 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 LAMTOR2Q9Y2Q5 125 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 LINC01549A6NIU2 74 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 INSP01308 110 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 LYZL1Q6UWQ5 148 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 TRAV9-2A0A087WT02 112 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 LINC00473A8K010 186 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 Q6P435 159 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 LINC00477Q96M19 166 aa14.72□□□□□ -0.05
COL18A1-202ENST00000355480 E7EQL1 145 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 IGFL4Q6B9Z1 124 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 RHPN1-AS1Q9BWJ2 59 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 A0A0G2JMZ2 1700 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 LRRC37A2A6NM11 1700 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 LCTP09848 1927 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 D6R8Y8 96 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 PRR30Q53SZ7 412 aaPredicted RBP14.71□□□□□ -0.05
COL18A1-202ENST00000355480 LCN12Q6JVE5 192 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 TMEM190Q8WZ59 177 aa14.71□□□□□ -0.05
COL18A1-202ENST00000355480 KIF26BQ2KJY2 2108 aa14.71□□□□□ -0.06
COL18A1-202ENST00000355480 GGTLC3B5MD39 225 aa14.71□□□□□ -0.06
COL18A1-202ENST00000355480 AGMATQ9BSE5 352 aa14.71□□□□□ -0.06
COL18A1-202ENST00000355480 NYNRINQ9P2P1 1898 aaKnown RBP14.71□□□□□ -0.06
COL18A1-202ENST00000355480 PRR31Q5SQ13 230 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 FGF16O43320 207 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 SUPT4H1P63272 117 aaKnown RBP14.7□□□□□ -0.06
COL18A1-202ENST00000355480 TMEM155Q4W5P6 130 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 SH2D1AO60880 128 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 NPC2P61916 151 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 ACACAQ13085 2346 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 NMSQ5H8A3 153 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 SCN5AQ14524 2016 aa14.7□□□□□ -0.06
COL18A1-202ENST00000355480 SPTBN1Q01082 2364 aaKnown RBP14.69□□□□□ -0.06
COL18A1-202ENST00000355480 HGFACQ04756 655 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 DMRTA1Q5VZB9 504 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 SLC25A2Q9BXI2 301 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 SYNJ2BPP57105 145 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 K7ENP7 123 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 NDUFS8O00217 210 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 RUSC1-AS1Q66K80 236 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 OVOL3O00110 214 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 LINC00205P59089 165 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 TEX43Q6ZNM6 134 aa14.69□□□□□ -0.06
COL18A1-202ENST00000355480 M0R2P5 195 aa14.68□□□□□ -0.06
COL18A1-202ENST00000355480 Q5PR19 223 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms