RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 LY96Q9Y6Y9 160 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 ARL2-SNX15V9GYD0 113 aa15.98■□□□□ 0.15
RIPPLY3-201ENST00000329553 PSMB11A5LHX3 300 aa15.97■□□□□ 0.15
RIPPLY3-201ENST00000329553 NPIPB5A8MRT5 1133 aa15.97■□□□□ 0.15
RIPPLY3-201ENST00000329553 YPEL3P61236 119 aaPredicted RBP15.97■□□□□ 0.15
RIPPLY3-201ENST00000329553 Q5PR19 223 aa15.97■□□□□ 0.15
RIPPLY3-201ENST00000329553 TTC9CQ8N5M4 171 aa15.97■□□□□ 0.15
RIPPLY3-201ENST00000329553 C22orf15Q8WYQ4 148 aa15.97■□□□□ 0.15
RIPPLY3-201ENST00000329553 K7EIM0 57 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 K7EN84 100 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 REC114Q7Z4M0 266 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 TMEM219Q86XT9 240 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 OR1L6Q8NGR2 347 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 OR5G3P0C626 314 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 SELENOTP62341 195 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 FANCD2OSQ96PS1 177 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 UHRF2Q96PU4 802 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 TRGV9Q99603 122 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 C19orf24Q9BVV8 132 aa15.96■□□□□ 0.15
RIPPLY3-201ENST00000329553 SH2D7A6NKC9 451 aaPredicted RBP15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 TGFAP01135 160 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 DNAJC4Q9NNZ3 241 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 NAV2Q8IVL1 2488 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 APCP25054 2843 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 TRAV9-1A0A075B6T8 112 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 HNF1AP20823 631 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 ZNF664Q8N3J9 261 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 C5orf56Q8N8D9 126 aa15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 RBM14Q96PK6 669 aaKnown RBP15.95■□□□□ 0.14
RIPPLY3-201ENST00000329553 PATE2Q6UY27 113 aa15.94■□□□□ 0.14
RIPPLY3-201ENST00000329553 IL36BQ9NZH7 164 aa15.94■□□□□ 0.14
RIPPLY3-201ENST00000329553 NBPF19A0A087WUL8 3843 aa15.94■□□□□ 0.14
RIPPLY3-201ENST00000329553 IGLV11-55A0A075B6I3 123 aa15.94■□□□□ 0.14
RIPPLY3-201ENST00000329553 TMEM167BQ9NRX6 74 aa15.94■□□□□ 0.14
RIPPLY3-201ENST00000329553 CR1P17927 2039 aa15.93■□□□□ 0.14
RIPPLY3-201ENST00000329553 LINC01548A6NM66 108 aa15.93■□□□□ 0.14
RIPPLY3-201ENST00000329553 MORN5Q5VZ52 161 aa15.93■□□□□ 0.14
RIPPLY3-201ENST00000329553 MBD6Q96DN6 1003 aa15.93■□□□□ 0.14
RIPPLY3-201ENST00000329553 TECRQ9NZ01 308 aaKnown RBP15.93■□□□□ 0.14
RIPPLY3-201ENST00000329553 IGLC1P0CG04 106 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 KRTAP1-3Q8IUG1 177 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 ZNF503Q96F45 646 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 Q96MF0 132 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 NOL4LQ96MY1 436 aaPredicted RBP15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 A8MWP6 167 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 ATP6V0E1O15342 81 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 COX7A2P2O60397 106 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 IGHV4-31P0DP07 118 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 ADMP35318 185 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 MOB4Q9Y3A3 225 aa15.92■□□□□ 0.14
RIPPLY3-201ENST00000329553 AMY1AP04745 511 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 C10orf113Q5VZT2 155 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 TMEM256Q8N2U0 113 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 OR1L4Q8NGR5 311 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 CSPG4Q6UVK1 2322 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 TRAV5A0A0B4J249 113 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 ZNF705GA8MUZ8 300 aaPredicted RBP15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 J3QLI3 93 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 SLC17A3O00476 420 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 C8orf88P0DMB2 117 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 TMUB1Q9BVT8 246 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 MRPL32Q9BYC8 188 aaKnown RBP15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 S4R3C0 116 aa15.91■□□□□ 0.14
RIPPLY3-201ENST00000329553 H3BUX3 64 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 ORM2P19652 201 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 LY6EQ16553 131 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 TIGITQ495A1 244 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 UNQ5815/PRO19632Q6UWF5 114 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 PQLC2Q6ZP29 291 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 RNF2Q99496 336 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 A0A1B0GUS0 222 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 NUPR1O60356 82 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 TAS2R45P59539 299 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 ECSCRQ19T08 205 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 PRSS57Q6UWY2 283 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 FAM167A-AS1Q96KT0 104 aa15.9■□□□□ 0.14
RIPPLY3-201ENST00000329553 OR7C2O60412 319 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 IGKV1-17P01599 117 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 PSG1P11464 419 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 BPIFB3P59826 476 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 IQCJQ1A5X6 159 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 OR1B1Q8NGR6 318 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 SLC25A2Q9BXI2 301 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 V9GYV3 84 aa15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 HELZ2Q9BYK8 2649 aaKnown RBP15.89■□□□□ 0.13
RIPPLY3-201ENST00000329553 A6NDX4 124 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 HELTA6NFD8 242 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 OR2J3O76001 311 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 NDUFB8O95169 186 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 ZNF355PQ9NSJ1 428 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 G3V318 75 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 OR10J4P0C629 311 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 CBLN1P23435 193 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 CRYBB3P26998 211 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 CENPWQ5EE01 88 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 LINC00305Q7Z4B0 112 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 FAM110DQ8TAY7 271 aaPredicted RBP15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 THYN1Q9P016 225 aa15.88■□□□□ 0.13
RIPPLY3-201ENST00000329553 ZANQ9Y493 2812 aa15.87■□□□□ 0.13
RIPPLY3-201ENST00000329553 GNG4P50150 75 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms