RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 KIR3DS1Q14943 382 aa11.65□□□□□ -0.54
COL1A2-201ENST00000297268 TMEM101Q96IK0 257 aa11.65□□□□□ -0.54
COL1A2-201ENST00000297268 DUX3Q96PT4 197 aa11.65□□□□□ -0.55
COL1A2-201ENST00000297268 PRDM6Q9NQX0 595 aa11.65□□□□□ -0.55
COL1A2-201ENST00000297268 MYLKQ15746 1914 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 ESDP10768 282 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 PAX9P55771 341 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 TRGV9Q99603 122 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 PTPRDP23468 1912 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 CD5LO43866 347 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 RHOGP84095 191 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 PAX2Q02962 417 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 ZNF726P1Q15940 193 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 ATP5J2P56134 94 aa11.64□□□□□ -0.55
COL1A2-201ENST00000297268 CENPVQ7Z7K6 275 aaPredicted RBP11.64□□□□□ -0.55
COL1A2-201ENST00000297268 NEU4Q8WWR8 484 aaPredicted RBP11.64□□□□□ -0.55
COL1A2-201ENST00000297268 NDUFS8O00217 210 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 MBNL3Q9NUK0 354 aaKnown RBP11.63□□□□□ -0.55
COL1A2-201ENST00000297268 TRAV8-1A0A0A6YYK1 113 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 LIME1Q9H400 295 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 LSM4Q9Y4Z0 139 aaKnown RBP11.63□□□□□ -0.55
COL1A2-201ENST00000297268 PLXNA3P51805 1871 aa11.63□□□□□ -0.55
COL1A2-201ENST00000297268 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 LYNX1G3V0Z9 82 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 LYNX1P0DP58 116 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 ZNF318Q5VUA4 2279 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 GTSF1LQ9H1H1 148 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 TOMM7Q9P0U1 55 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 NPSP0C0P6 89 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 MLANAQ16655 118 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 TNFRSF14Q92956 283 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 TRBV7-9A0A0J9YWB2 115 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 A0A1B0GWJ7 208 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 NTN3O00634 580 aaPredicted RBP11.62□□□□□ -0.55
COL1A2-201ENST00000297268 CKS1BP61024 79 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
COL1A2-201ENST00000297268 CNTFRP26992 372 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 B3GALT5-AS1P59052 145 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 RPL15P61313 204 aaKnown RBP11.61□□□□□ -0.55
COL1A2-201ENST00000297268 KLF17Q5JT82 389 aaPredicted RBP11.61□□□□□ -0.55
COL1A2-201ENST00000297268 SH2D1AO60880 128 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 CSRP2Q16527 193 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 Q6ZWC4 215 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 C18orf32Q8TCD1 76 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 LRRK1Q38SD2 2015 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 H0YJW9 148 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 Q0VFX4 171 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 TOMM40O96008 361 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 CYYR1Q96J86 154 aa11.61□□□□□ -0.55
COL1A2-201ENST00000297268 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
COL1A2-201ENST00000297268 IGHV2-26A0A0B4J1V2 119 aa11.6□□□□□ -0.55
COL1A2-201ENST00000297268 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
COL1A2-201ENST00000297268 PSG3Q16557 428 aa11.6□□□□□ -0.55
COL1A2-201ENST00000297268 WISP1O95388 367 aa11.6□□□□□ -0.55
COL1A2-201ENST00000297268 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
COL1A2-201ENST00000297268 FNDC10F2Z333 226 aa11.6□□□□□ -0.55
COL1A2-201ENST00000297268 ITLN2Q8WWU7 325 aaPredicted RBP11.6□□□□□ -0.55
COL1A2-201ENST00000297268 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 PLNP26678 52 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 VWA8A3KMH1 1905 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 IGLC2P0DOY2 106 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 IGLC3P0DOY3 106 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 SCN5AQ14524 2016 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 Q8TAT8 98 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 ABHD17AQ96GS6 310 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 LINC01587Q99440 93 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 SMKR1H3BMG3 65 aa11.59□□□□□ -0.55
COL1A2-201ENST00000297268 SMAD7O15105 426 aaKnown RBP11.59□□□□□ -0.55
COL1A2-201ENST00000297268 CD28P10747 220 aa11.58□□□□□ -0.55
COL1A2-201ENST00000297268 ZC2HC1BQ5TFG8 222 aa11.58□□□□□ -0.55
COL1A2-201ENST00000297268 ZFAND6Q6FIF0 208 aa11.58□□□□□ -0.55
COL1A2-201ENST00000297268 VOPP1Q96AW1 172 aa11.58□□□□□ -0.55
COL1A2-201ENST00000297268 CCL19Q99731 98 aa11.58□□□□□ -0.55
COL1A2-201ENST00000297268 PLSCR4Q9NRQ2 329 aa11.58□□□□□ -0.55
COL1A2-201ENST00000297268 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 PRTN3P24158 256 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 GAGE2EQ4V326 116 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 OCIAD2Q56VL3 154 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 Q86TA4 180 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 CST9LQ9H4G1 147 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 GAGE2DQ9UEU5 116 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 SIGLEC15Q6ZMC9 328 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 TMEM158Q8WZ71 300 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 RNASE6Q93091 150 aaKnown RBP11.58□□□□□ -0.56
COL1A2-201ENST00000297268 ZNF524Q96C55 264 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 PHF3Q92576 2039 aaKnown RBP11.58□□□□□ -0.56
COL1A2-201ENST00000297268 WIPF3A6NGB9 483 aa11.58□□□□□ -0.56
COL1A2-201ENST00000297268 STPG4Q8N801 248 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms