RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 CD5P06127 495 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 RIPPLY3P57055 190 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 NDPQ00604 133 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 TPRP12270 2363 aaKnown RBP9.48□□□□□ -0.89
LAMA4-201ENST00000230538 PSPNO60542 156 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 CABIN1Q9Y6J0 2220 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 TRAV3A0A0B4J244 114 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 SUPT4H1P63272 117 aaKnown RBP9.48□□□□□ -0.89
LAMA4-201ENST00000230538 SEC11AP67812 179 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 ZNF474Q6S9Z5 364 aaPredicted RBP9.48□□□□□ -0.89
LAMA4-201ENST00000230538 JPT2Q9H910 190 aa9.48□□□□□ -0.89
LAMA4-201ENST00000230538 TRGV1A0A0A0MS02 117 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 C5orf63A6NC05 138 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 SH2D1AO60880 128 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 ZNF138P52744 262 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 DOCK3Q8IZD9 2030 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 TCRAP04437 139 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
LAMA4-201ENST00000230538 LHFPL1Q86WI0 220 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 SRRM4A7MD48 611 aaKnown RBP9.47□□□□□ -0.89
LAMA4-201ENST00000230538 H0YJW9 148 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 GAGE13Q4V321 117 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 DTX1Q86Y01 620 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 HIST3H2BBQ8N257 126 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 RNF5Q99942 180 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 CRIM1Q9NZV1 1036 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 TOMM40O96008 361 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 ASCL4Q6XD76 172 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 RNF144BQ7Z419 303 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 OOSP1A8MZH6 123 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
LAMA4-201ENST00000230538 TEX43Q6ZNM6 134 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 DMRTC2Q8IXT2 367 aaPredicted RBP9.47□□□□□ -0.89
LAMA4-201ENST00000230538 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
LAMA4-201ENST00000230538 KLHDC3Q9BQ90 382 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 AGMATQ9BSE5 352 aa9.47□□□□□ -0.89
LAMA4-201ENST00000230538 IGHV3-53P01767 116 aa9.46□□□□□ -0.89
LAMA4-201ENST00000230538 RASL11AQ6T310 242 aa9.46□□□□□ -0.89
LAMA4-201ENST00000230538 PNRC2Q9NPJ4 139 aaKnown RBP9.46□□□□□ -0.89
LAMA4-201ENST00000230538 SNRNP200O75643 2136 aaKnown RBP9.46□□□□□ -0.89
LAMA4-201ENST00000230538 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.46□□□□□ -0.89
LAMA4-201ENST00000230538 H3BUX3 64 aa9.46□□□□□ -0.89
LAMA4-201ENST00000230538 BRD3OSQ6XYD6 125 aa9.46□□□□□ -0.89
LAMA4-201ENST00000230538 SIGMAR1Q99720 223 aa9.46□□□□□ -0.89
LAMA4-201ENST00000230538 PAX4O43316 350 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 LILRA1O75019 489 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 SRSF4Q08170 494 aaKnown RBP9.46□□□□□ -0.9
LAMA4-201ENST00000230538 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 COLCA2A8K830 154 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 C20orf204Q6ZNR8 217 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 GAFA1Q96PS6 74 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.9
LAMA4-201ENST00000230538 TRBV24-1A0A075B6N3 115 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 BUB1B-PAK6H3BSN5 160 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 M0R1W7 72 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 FCN3O75636 299 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 PSG3Q16557 428 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 TMEM249Q2WGJ8 235 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.9
LAMA4-201ENST00000230538 SCN5AQ14524 2016 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 A0A0G2JNJ9 132 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 IGKV1-5P01602 117 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 Q9UFV3 132 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 A0A1B0GW64 132 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 B4DSR2 109 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 TNFSF13O75888 250 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 TMEM155Q4W5P6 130 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 LINC00477Q96M19 166 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 ZNF581Q9P0T4 197 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 GNLYP22749 145 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 Q0VFX4 171 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 RASL10AQ92737 203 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 AMBPP02760 352 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
LAMA4-201ENST00000230538 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 Q8TAT8 98 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 SIP14410 1827 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 REG4Q9BYZ8 158 aa9.45□□□□□ -0.9
LAMA4-201ENST00000230538 RALGAPA1Q6GYQ0 2036 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 NMSQ5H8A3 153 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 NUP35Q8NFH5 326 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 ZSWIM8A7E2V4 1837 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 VCYO14598 125 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 SSC4DQ8WTU2 575 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 FAM223BA6NKX1 122 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 ERCC8Q13216 396 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 FAM223AQ8IWN6 122 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 TMEM14EPQ6UXP3 125 aa9.44□□□□□ -0.9
LAMA4-201ENST00000230538 GLRX5Q86SX6 157 aa9.43□□□□□ -0.9
LAMA4-201ENST00000230538 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms