RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SRSF4Q08170 494 aaKnown RBP18.92■□□□□ 0.62
TARBP1-201ENST00000040877 FAM19A2Q8N3H0 131 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 BPESC1Q9GZL8 116 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 COL4A6Q14031 1691 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 BEND2Q8NDZ0 799 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 NRN1Q9NPD7 142 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 CEACAM8P31997 349 aaPredicted RBP18.92■□□□□ 0.62
TARBP1-201ENST00000040877 ROS1P08922 2347 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 MYO7BQ6PIF6 2116 aa18.92■□□□□ 0.62
TARBP1-201ENST00000040877 TRAV3A0A0B4J244 114 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 TDGF1P13385 188 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 SNAI2O43623 268 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 SCGB1A1P11684 91 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 LMO1P25800 156 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 NSUN5P1Q3KNT7 163 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 BRD3OSQ6XYD6 125 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 DTX1Q86Y01 620 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 SPOCK3Q9BQ16 436 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 LY96Q9Y6Y9 160 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 LINC00614P0C842 121 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 JKAMPQ9P055 326 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 LYPD2Q6UXB3 125 aa18.91■□□□□ 0.62
TARBP1-201ENST00000040877 CHCHD1Q96BP2 118 aaKnown RBP18.91■□□□□ 0.62
TARBP1-201ENST00000040877 AGMATQ9BSE5 352 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 SCRT1Q9BWW7 348 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 TRBV24-1A0A075B6N3 115 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 ADMP35318 185 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 RPP25LQ8N5L8 163 aaKnown RBP18.9■□□□□ 0.62
TARBP1-201ENST00000040877 TCRAP04437 139 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 HIST3H2BBQ8N257 126 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 RNASE1P07998 156 aaKnown RBP18.9■□□□□ 0.62
TARBP1-201ENST00000040877 MRPL16Q9NX20 251 aaKnown RBP18.9■□□□□ 0.62
TARBP1-201ENST00000040877 TOMM7Q9P0U1 55 aa18.9■□□□□ 0.62
TARBP1-201ENST00000040877 ZNF138P52744 262 aa18.89■□□□□ 0.62
TARBP1-201ENST00000040877 RASL11AQ6T310 242 aa18.89■□□□□ 0.62
TARBP1-201ENST00000040877 RNF144BQ7Z419 303 aa18.89■□□□□ 0.62
TARBP1-201ENST00000040877 LINC00477Q96M19 166 aa18.89■□□□□ 0.62
TARBP1-201ENST00000040877 SSBP4Q9BWG4 385 aaPredicted RBP18.89■□□□□ 0.62
TARBP1-201ENST00000040877 SAP30O75446 220 aa18.89■□□□□ 0.61
TARBP1-201ENST00000040877 CACNA1BQ00975 2339 aa18.89■□□□□ 0.61
TARBP1-201ENST00000040877 NUDT10Q8NFP7 164 aa18.89■□□□□ 0.61
TARBP1-201ENST00000040877 NUDT11Q96G61 164 aa18.89■□□□□ 0.61
TARBP1-201ENST00000040877 PROK2Q9HC23 129 aa18.88■□□□□ 0.61
TARBP1-201ENST00000040877 TOMM40O96008 361 aa18.88■□□□□ 0.61
TARBP1-201ENST00000040877 GHRHP01286 108 aa18.88■□□□□ 0.61
TARBP1-201ENST00000040877 FOXL1Q12952 345 aa18.88■□□□□ 0.61
TARBP1-201ENST00000040877 HEATR1Q9H583 2144 aaKnown RBP18.88■□□□□ 0.61
TARBP1-201ENST00000040877 SPCS1Q9Y6A9 102 aa18.88■□□□□ 0.61
TARBP1-201ENST00000040877 NPIPB5A8MRT5 1133 aa18.88■□□□□ 0.61
TARBP1-201ENST00000040877 RPL15P61313 204 aaKnown RBP18.88■□□□□ 0.61
TARBP1-201ENST00000040877 SEPSECSQ9HD40 501 aaKnown RBP18.88■□□□□ 0.61
TARBP1-201ENST00000040877 BEX4Q9NWD9 120 aaPredicted RBP18.88■□□□□ 0.61
TARBP1-201ENST00000040877 SAA4P35542 130 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 NBL1P41271 181 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 UBE2E1P51965 193 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 GFI1BQ5VTD9 330 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 C11orf44Q8N8P7 122 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 PGPEP1LA6NFU8 196 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 RNASE2P10153 161 aaKnown RBP18.87■□□□□ 0.61
TARBP1-201ENST00000040877 DIDO1Q9BTC0 2240 aaKnown RBP18.87■□□□□ 0.61
TARBP1-201ENST00000040877 SPATA31B1PQ5VZV4 182 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 PIP4P2Q8N4L2 257 aa18.87■□□□□ 0.61
TARBP1-201ENST00000040877 C15orf62A8K5M9 175 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 CD33P20138 364 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 DPM2O94777 84 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 LYL1P12980 280 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 RBMY1BA6NDE4 496 aaKnown RBP18.86■□□□□ 0.61
TARBP1-201ENST00000040877 RBMY1EA6NEQ0 496 aaKnown RBP18.86■□□□□ 0.61
TARBP1-201ENST00000040877 MSMBP08118 114 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 RBMY1DP0C7P1 496 aaKnown RBP18.86■□□□□ 0.61
TARBP1-201ENST00000040877 RBMY1A1P0DJD3 496 aaKnown RBP18.86■□□□□ 0.61
TARBP1-201ENST00000040877 RBMY1CP0DJD4 496 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 TICRRQ7Z2Z1 1910 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 NDUFA3O95167 84 aa18.86■□□□□ 0.61
TARBP1-201ENST00000040877 MALP21145 153 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 RFNGQ9Y644 331 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 IGKV2-40A0A087WW87 121 aaPredicted RBP18.85■□□□□ 0.61
TARBP1-201ENST00000040877 A0A1B0GWB2 263 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 IGKV2D-40P01614 121 aaPredicted RBP18.85■□□□□ 0.61
TARBP1-201ENST00000040877 TNFSF13O75888 250 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 NTF4P34130 210 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 ZNF562Q6V9R5 426 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 C1QL4Q86Z23 238 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 C1QTNF4Q9BXJ3 329 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 TSC2P49815 1807 aa18.85■□□□□ 0.61
TARBP1-201ENST00000040877 CXCL1P09341 107 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 SP5Q6BEB4 398 aaPredicted RBP18.84■□□□□ 0.61
TARBP1-201ENST00000040877 EXOC3-AS1Q8N2X6 119 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 RNF166Q96A37 237 aaPredicted RBP18.84■□□□□ 0.61
TARBP1-201ENST00000040877 DERL1Q9BUN8 251 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 KLF17Q5JT82 389 aaPredicted RBP18.84■□□□□ 0.61
TARBP1-201ENST00000040877 CACNA1HO95180 2353 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 NDUFS6O75380 124 aaKnown RBP18.84■□□□□ 0.61
TARBP1-201ENST00000040877 SRD5A1P18405 259 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 PPIFP30405 207 aaKnown RBP18.84■□□□□ 0.61
TARBP1-201ENST00000040877 PIP4P1Q86T03 277 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 LINC01551Q86U37 167 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 SMPXQ9UHP9 88 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 RNF114Q9Y508 228 aa18.84■□□□□ 0.61
TARBP1-201ENST00000040877 A6NNC1 897 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms