RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TXN2Q99757 166 aa7.23□□□□□ -1.25
PHGDH-228ENST00000641847 PARD6GQ9BYG4 376 aaPredicted RBP7.23□□□□□ -1.25
PHGDH-228ENST00000641847 LSM4Q9Y4Z0 139 aaKnown RBP7.23□□□□□ -1.25
PHGDH-228ENST00000641847 RYR1P21817 5038 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 IGKV1D-37A0A075B6S9 117 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 A0A1W2PRX2 142 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 ANKRD34BA5PLL1 514 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 PPP5D1E7EU14 171 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 TGOLN2O43493 480 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 JTBO76095 146 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 TRBV12-3P01733 135 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 CLEC3BP05452 202 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 ARL3P36405 182 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 RUNX1Q01196 453 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 EGFEM1PQ0D2K5 195 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 RAB31Q13636 194 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 CYP2G1PQ6ZSU1 146 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 SLC51BQ86UW2 128 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 HSD17B11Q8NBQ5 300 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 KLHL30-AS1Q8NEE0 82 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 C4orf3Q8WVX3 66 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 ATP6V0BQ99437 205 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 TRGV9Q99603 122 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 RSG1Q9BU20 258 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 NPCDR1Q9BY65 106 aa7.22□□□□□ -1.25
PHGDH-228ENST00000641847 GAR1Q9NY12 217 aaKnown RBP7.22□□□□□ -1.25
PHGDH-228ENST00000641847 TSSC4Q9Y5U2 329 aaPredicted RBP7.22□□□□□ -1.25
PHGDH-228ENST00000641847 TRAV30A0A087WSZ9 112 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 BMPR1BO00238 502 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 AGPAT2O15120 278 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 NUPL2O15504 423 aaKnown RBP7.21□□□□□ -1.26
PHGDH-228ENST00000641847 MPDU1O75352 247 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 IGKV1-17P01599 117 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 TPT1P13693 172 aaKnown RBP7.21□□□□□ -1.26
PHGDH-228ENST00000641847 CDX1P47902 265 aaPredicted RBP7.21□□□□□ -1.26
PHGDH-228ENST00000641847 CAMLGP49069 296 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 EIF5AP63241 154 aaKnown RBP7.21□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF90Q03938 601 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 FAM209BQ5JX69 171 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 SPSB3Q6PJ21 355 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 STOML3Q8TAV4 291 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 GINS3Q9BRX5 216 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 CHRDL1Q9BU40 450 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 GGTLC1Q9BX51 225 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 SH3BGRL3Q9H299 93 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 KCNIP2Q9NS61 270 aa7.21□□□□□ -1.26
PHGDH-228ENST00000641847 PEF1Q9UBV8 284 aaKnown RBP7.21□□□□□ -1.26
PHGDH-228ENST00000641847 HYDINQ4G0P3 5121 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 IGHV4OR15-8A0A075B7B6 117 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 A0A087WW49 117 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 C17orf112F2Z3M2 114 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 I3L521 148 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 GGCTO75223 188 aaKnown RBP7.2□□□□□ -1.26
PHGDH-228ENST00000641847 FABP1P07148 127 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 CTSGP08311 255 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 GATA2P23769 480 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-228ENST00000641847 ATP6V0CP27449 155 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 HOXD3P31249 432 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-228ENST00000641847 ADMP35318 185 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 MIC13Q5XKP0 118 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 TMEM182Q6ZP80 229 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-228ENST00000641847 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 BAP18Q8IXM2 172 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 STPG3Q8N7X2 389 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 BPIFCQ8NFQ6 507 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 GNPNAT1Q96EK6 184 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-228ENST00000641847 MCRIP2Q9BUT9 160 aaKnown RBP7.2□□□□□ -1.26
PHGDH-228ENST00000641847 ARV1Q9H2C2 271 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 SLC45A2Q9UMX9 530 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 TIMM9Q9Y5J7 89 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 PXMP4Q9Y6I8 212 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
PHGDH-228ENST00000641847 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 IGHV3-35A0A0C4DH35 117 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 ADARB2-AS1A8MUL3 147 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 TOMM40O96008 361 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 HSPB1P04792 205 aaKnown RBP7.19□□□□□ -1.26
PHGDH-228ENST00000641847 LINC00869P0C866 280 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 RD3LP0DJH9 198 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 PSG1P11464 419 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 ELLP55199 621 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-228ENST00000641847 YPEL3P61236 119 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-228ENST00000641847 B2MP61769 119 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 SELENOTP62341 195 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 RELQ04864 619 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF616Q08AN1 781 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 RPEL1Q2QD12 228 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 ZNF600Q6ZNG1 722 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 PSMG3Q9BT73 122 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-228ENST00000641847 SLC25A32Q9H2D1 315 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 PUS1Q9Y606 427 aaKnown RBP eCLIP7.19□□□□□ -1.26
PHGDH-228ENST00000641847 RFNGQ9Y644 331 aa7.19□□□□□ -1.26
PHGDH-228ENST00000641847 LINC01619G3V211 115 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 YIF1AO95070 293 aa7.18□□□□□ -1.26
PHGDH-228ENST00000641847 OR2C1O95371 312 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms