RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 H3BP45 60 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 UBE2CO00762 179 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 LYRM1O43325 122 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 SPANXN5Q5MJ07 72 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 DCANP1Q8TF63 244 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 GLMPQ8WWB7 406 aa14.02□□□□□ -0.17
TPM4-204ENST00000586499 CIB3Q96Q77 187 aaPredicted RBP14.02□□□□□ -0.17
TPM4-204ENST00000586499 TENM2Q9NT68 2774 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 PRSS46E5RG02 174 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 POLR2GP62487 172 aaKnown RBP eCLIP14.01□□□□□ -0.17
TPM4-204ENST00000586499 ID3Q02535 119 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 RNF183Q96D59 192 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 RNF125Q96EQ8 232 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 PBDC1Q9BVG4 233 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 CSTL1Q9H114 145 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 C20orf85Q9H1P6 137 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 TP53TG1Q9Y2A0 90 aa14.01□□□□□ -0.17
TPM4-204ENST00000586499 SACSQ9NZJ4 4579 aa14□□□□□ -0.17
TPM4-204ENST00000586499 IGKV1OR2-108A0A075B7D4 117 aa14□□□□□ -0.17
TPM4-204ENST00000586499 BUB3O43684 328 aa14□□□□□ -0.17
TPM4-204ENST00000586499 IFNA21P01568 189 aa14□□□□□ -0.17
TPM4-204ENST00000586499 ZNF688P0C7X2 276 aa14□□□□□ -0.17
TPM4-204ENST00000586499 OR2F1Q13607 317 aa14□□□□□ -0.17
TPM4-204ENST00000586499 OR4D5Q8NGN0 318 aa14□□□□□ -0.17
TPM4-204ENST00000586499 TRAV6A0A075B6T7 132 aa13.99□□□□□ -0.17
TPM4-204ENST00000586499 A0A0J9YWU9 116 aa13.99□□□□□ -0.17
TPM4-204ENST00000586499 NKX2-1P43699 371 aaPredicted RBP13.99□□□□□ -0.17
TPM4-204ENST00000586499 RPP30P78346 268 aaKnown RBP13.99□□□□□ -0.17
TPM4-204ENST00000586499 EWSR1Q01844 656 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■□□ 16.2
TPM4-204ENST00000586499 HELTA6NFD8 242 aa13.98□□□□□ -0.17
TPM4-204ENST00000586499 TCRBP04435 133 aa13.98□□□□□ -0.17
TPM4-204ENST00000586499 CNPY1Q3B7I2 92 aa13.98□□□□□ -0.17
TPM4-204ENST00000586499 MITD1Q8WV92 249 aa13.98□□□□□ -0.17
TPM4-204ENST00000586499 STRAPQ9Y3F4 350 aaKnown RBP13.98□□□□□ -0.17
TPM4-204ENST00000586499 A6NHS1 94 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 KNCNA6PVL3 124 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 SSSCA1O60232 199 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 EIF2B2P49770 351 aaKnown RBP13.97□□□□□ -0.17
TPM4-204ENST00000586499 AP2S1P53680 142 aaPredicted RBP13.97□□□□□ -0.17
TPM4-204ENST00000586499 PAX9P55771 341 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 LYZP61626 148 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 IAH1Q2TAA2 248 aaPredicted RBP13.97□□□□□ -0.17
TPM4-204ENST00000586499 GSG1LQ6UXU4 331 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 SIGLEC15Q6ZMC9 328 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 THAP8Q8NA92 274 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 TRGV9Q99603 122 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 CCDC32Q9BV29 185 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 PSENENQ9NZ42 101 aa13.97□□□□□ -0.17
TPM4-204ENST00000586499 SNRPGP15A8MWD9 76 aa13.96□□□□□ -0.17
TPM4-204ENST00000586499 SCGB1D2O95969 90 aa13.96□□□□□ -0.17
TPM4-204ENST00000586499 TMEM182Q6ZP80 229 aaPredicted RBP13.96□□□□□ -0.17
TPM4-204ENST00000586499 STHQ8IWL8 128 aa13.96□□□□□ -0.17
TPM4-204ENST00000586499 IL17DQ8TAD2 202 aa13.96□□□□□ -0.17
TPM4-204ENST00000586499 SEC22CQ9BRL7 303 aa13.96□□□□□ -0.17
TPM4-204ENST00000586499 GSKIPQ9P0R6 139 aa13.96□□□□□ -0.17
TPM4-204ENST00000586499 AGRNO00468 2067 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 CCSO14618 274 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 CCNKO75909 580 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 CA1P00915 261 aaPredicted RBP13.95□□□□□ -0.18
TPM4-204ENST00000586499 FABP1P07148 127 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 GATA2P23769 480 aaPredicted RBP13.95□□□□□ -0.18
TPM4-204ENST00000586499 PSMG4Q5JS54 123 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 ACOT7LQ6ZUV0 252 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 ZBTB8BQ8NAP8 495 aaPredicted RBP13.95□□□□□ -0.18
TPM4-204ENST00000586499 SMIM8Q96KF7 97 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 NRN1Q9NPD7 142 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 NUDT15Q9NV35 164 aa13.95□□□□□ -0.18
TPM4-204ENST00000586499 PMS2P5A8MQ11 134 aa13.94□□□□□ -0.18
TPM4-204ENST00000586499 ACTL10Q5JWF8 245 aa13.94□□□□□ -0.18
TPM4-204ENST00000586499 OR8G2PQ6IF36 304 aa13.94□□□□□ -0.18
TPM4-204ENST00000586499 LINC00299Q6ZSB3 139 aa13.94□□□□□ -0.18
TPM4-204ENST00000586499 TRPT1Q86TN4 253 aaKnown RBP13.94□□□□□ -0.18
TPM4-204ENST00000586499 TBC1D24Q9ULP9 559 aa13.94□□□□□ -0.18
TPM4-204ENST00000586499 GIG44P09565 113 aaPredicted RBP13.93□□□□□ -0.18
TPM4-204ENST00000586499 AKR1C1Q04828 323 aa13.93□□□□□ -0.18
TPM4-204ENST00000586499 RAB40CQ96S21 281 aa13.93□□□□□ -0.18
TPM4-204ENST00000586499 RARRES2Q99969 163 aa13.93□□□□□ -0.18
TPM4-204ENST00000586499 LCE6AA0A183 80 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 SMCO3A2RU48 225 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 H2AFB2P0C5Z0 115 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 METTL15P1P0C7V9 234 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
TPM4-204ENST00000586499 PMS2P11Q13670 270 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 OR11H2Q8NH07 326 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 ZNF431Q8TF32 576 aaPredicted RBP13.92□□□□□ -0.18
TPM4-204ENST00000586499 GATAD1Q8WUU5 269 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 S100ZQ8WXG8 99 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 PPP1R14BQ96C90 147 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 WDR12Q9GZL7 423 aaKnown RBP13.92□□□□□ -0.18
TPM4-204ENST00000586499 RCL1Q9Y2P8 373 aaKnown RBP13.92□□□□□ -0.18
TPM4-204ENST00000586499 LYSTQ99698 3801 aa13.92□□□□□ -0.18
TPM4-204ENST00000586499 FAM240BA0A1B0GVZ2 78 aa13.91□□□□□ -0.18
TPM4-204ENST00000586499 MBPP02686 304 aaPredicted RBP13.91□□□□□ -0.18
TPM4-204ENST00000586499 TMEM14EPQ6UXP3 125 aa13.91□□□□□ -0.18
TPM4-204ENST00000586499 PFDN2Q9UHV9 154 aa13.91□□□□□ -0.18
TPM4-204ENST00000586499 FAM25EA8MYX2 175 aa13.9□□□□□ -0.18
TPM4-204ENST00000586499 ORM2P19652 201 aa13.9□□□□□ -0.18
TPM4-204ENST00000586499 C4BPBP20851 252 aa13.9□□□□□ -0.18
TPM4-204ENST00000586499 NUP62P37198 522 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms