RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 DEDD2Q8WXF8 326 aa13.17□□□□□ -0.3
SRSF1-208ENST00000584773 SLC35E1Q96K37 410 aa13.17□□□□□ -0.3
SRSF1-208ENST00000584773 RARRES2Q99969 163 aa13.17□□□□□ -0.3
SRSF1-208ENST00000584773 PBDC1Q9BVG4 233 aa13.17□□□□□ -0.3
SRSF1-208ENST00000584773 C9orf170A2RU37 121 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 WRBO00258 174 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 DEFB4AO15263 64 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 GIG44P09565 113 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-208ENST00000584773 C4BPBP20851 252 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 BTCP35070 178 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 INPP1P49441 399 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 OR2F1Q13607 317 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 TRPT1Q86TN4 253 aaKnown RBP13.16□□□□□ -0.3
SRSF1-208ENST00000584773 OR11H2Q8NH07 326 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 TMED3Q9Y3Q3 217 aa13.16□□□□□ -0.3
SRSF1-208ENST00000584773 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 H3BP45 60 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 BUB3O43684 328 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 NDUFB6O95139 128 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 SLC25A6P12236 298 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-208ENST00000584773 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 ACTL10Q5JWF8 245 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
SRSF1-208ENST00000584773 HELTA6NFD8 242 aa13.14□□□□□ -0.31
SRSF1-208ENST00000584773 SYNGR2O43760 224 aa13.14□□□□□ -0.31
SRSF1-208ENST00000584773 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
SRSF1-208ENST00000584773 LYZP61626 148 aa13.14□□□□□ -0.31
SRSF1-208ENST00000584773 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
SRSF1-208ENST00000584773 FAM90A26D6RGX4 464 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 PRSS46E5RG02 174 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 IL7P13232 177 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 EIF2B2P49770 351 aaKnown RBP13.13□□□□□ -0.31
SRSF1-208ENST00000584773 DEFB1P60022 68 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 RAB11AP62491 216 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 MED6O75586 246 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-208ENST00000584773 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
SRSF1-208ENST00000584773 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-208ENST00000584773 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 NRN1Q9NPD7 142 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 CLEC5AQ9NY25 188 aa13.13□□□□□ -0.31
SRSF1-208ENST00000584773 NUPR2A6NF83 97 aa13.12□□□□□ -0.31
SRSF1-208ENST00000584773 OR4E1P0C645 316 aa13.12□□□□□ -0.31
SRSF1-208ENST00000584773 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-208ENST00000584773 UBE2MP61081 183 aaKnown RBP13.12□□□□□ -0.31
SRSF1-208ENST00000584773 POLR2GP62487 172 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRSF1-208ENST00000584773 THAP8Q8NA92 274 aa13.12□□□□□ -0.31
SRSF1-208ENST00000584773 WDR12Q9GZL7 423 aaKnown RBP13.12□□□□□ -0.31
SRSF1-208ENST00000584773 ATF4P18848 351 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-208ENST00000584773 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-208ENST00000584773 OR8G2PQ6IF36 304 aa13.11□□□□□ -0.31
SRSF1-208ENST00000584773 TMEM182Q6ZP80 229 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-208ENST00000584773 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
SRSF1-208ENST00000584773 PHLDA1Q8WV24 401 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-208ENST00000584773 LINC00476Q8WZB0 136 aa13.11□□□□□ -0.31
SRSF1-208ENST00000584773 CIB3Q96Q77 187 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-208ENST00000584773 TRGV9Q99603 122 aa13.11□□□□□ -0.31
SRSF1-208ENST00000584773 KMT2AQ03164 3969 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 CCNKO75909 580 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 GDF5OSQ5U4N7 250 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 ACOT7LQ6ZUV0 252 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 Q8NAQ8 132 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 COQ8AQ8NI60 647 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 C11orf68Q9H3H3 251 aaKnown RBP13.1□□□□□ -0.31
SRSF1-208ENST00000584773 FBXL17Q9UF56 701 aa13.1□□□□□ -0.31
SRSF1-208ENST00000584773 BIRC6Q9NR09 4857 aa13.09□□□□□ -0.31
SRSF1-208ENST00000584773 PLA2G10O15496 165 aa13.09□□□□□ -0.31
SRSF1-208ENST00000584773 SSSCA1O60232 199 aa13.09□□□□□ -0.31
SRSF1-208ENST00000584773 LY6G6CO95867 125 aa13.09□□□□□ -0.31
SRSF1-208ENST00000584773 SPP1P10451 314 aa13.09□□□□□ -0.31
SRSF1-208ENST00000584773 ID3Q02535 119 aa13.09□□□□□ -0.31
SRSF1-208ENST00000584773 IGHV4-28A0A0C4DH34 117 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 SNRPGP15A8MWD9 76 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 RBMY1A1P0DJD3 496 aaKnown RBP13.08□□□□□ -0.32
SRSF1-208ENST00000584773 RBMY1CP0DJD4 496 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
SRSF1-208ENST00000584773 RPP30P78346 268 aaKnown RBP13.08□□□□□ -0.32
SRSF1-208ENST00000584773 RBMY1FQ15415 496 aaKnown RBP13.08□□□□□ -0.32
SRSF1-208ENST00000584773 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
SRSF1-208ENST00000584773 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 C11orf45Q8TAV5 145 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
SRSF1-208ENST00000584773 X6R8D5 127 aa13.08□□□□□ -0.32
SRSF1-208ENST00000584773 CENPXA8MT69 81 aa13.07□□□□□ -0.32
SRSF1-208ENST00000584773 H3BMM0 161 aa13.07□□□□□ -0.32
SRSF1-208ENST00000584773 SOCS3O14543 225 aa13.07□□□□□ -0.32
SRSF1-208ENST00000584773 SCGB1D2O95969 90 aa13.07□□□□□ -0.32
SRSF1-208ENST00000584773 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
SRSF1-208ENST00000584773 NKX2-1P43699 371 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-208ENST00000584773 AKR1C1Q04828 323 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms