RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NCBP2LA6PVI3 153 aaKnown RBP16.11■□□□□ 0.17
SMG8-203ENST00000578922 COMPP49747 757 aaPredicted RBP16.11■□□□□ 0.17
SMG8-203ENST00000578922 C19orf35Q6ZS72 473 aa16.11■□□□□ 0.17
SMG8-203ENST00000578922 C1orf159Q96HA4 380 aa16.11■□□□□ 0.17
SMG8-203ENST00000578922 ABCA1O95477 2261 aa16.11■□□□□ 0.17
SMG8-203ENST00000578922 A0A096LNT2 108 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 IGHV4-38-2P0DP08 117 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 ATP5IP56385 69 aaPredicted RBP16.1■□□□□ 0.17
SMG8-203ENST00000578922 MLANAQ16655 118 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 ARSJQ5FYB0 599 aaPredicted RBP16.1■□□□□ 0.17
SMG8-203ENST00000578922 C11orf52Q96A22 123 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 ZFHX3Q15911 3703 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 ZANQ9Y493 2812 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 IGHV1-69DA0A0B4J2H0 117 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 IGHV1-69P01742 117 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 AREGP15514 252 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 SSBP2P81877 361 aaPredicted RBP16.1■□□□□ 0.17
SMG8-203ENST00000578922 C2orf83Q53S99 150 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 STPG3Q8N7X2 389 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 SGMS2Q8NHU3 365 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 UHRF2Q96PU4 802 aa16.1■□□□□ 0.17
SMG8-203ENST00000578922 TRBV20OR9-2A0A075B6H5 130 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 CNIH1O95406 144 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 TMEM11P17152 192 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 GBGT1Q8N5D6 347 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 ZNF114Q8NC26 417 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 OR10G8Q8NGN5 311 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 PRO1933Q9H354 126 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 SOX21Q9Y651 276 aaPredicted RBP16.09■□□□□ 0.17
SMG8-203ENST00000578922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMG8-203ENST00000578922 SCO2A0A1W2PP80 73 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 IGLC7A0M8Q6 106 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 C9JCJ5 164 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 YPEL3P61236 119 aaPredicted RBP16.09■□□□□ 0.17
SMG8-203ENST00000578922 LBHQ53QV2 105 aaPredicted RBP16.09■□□□□ 0.17
SMG8-203ENST00000578922 NPBQ8NG41 125 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 SSMEM1Q8WWF3 244 aa16.09■□□□□ 0.17
SMG8-203ENST00000578922 PRR20EP86478 221 aa16.08■□□□□ 0.16
SMG8-203ENST00000578922 PRR20CP86479 221 aa16.08■□□□□ 0.16
SMG8-203ENST00000578922 PRR20DP86480 221 aa16.08■□□□□ 0.16
SMG8-203ENST00000578922 PRR20BP86481 221 aa16.08■□□□□ 0.16
SMG8-203ENST00000578922 PRR20AP86496 221 aa16.08■□□□□ 0.16
SMG8-203ENST00000578922 TEX38Q6PEX7 206 aa16.08■□□□□ 0.16
SMG8-203ENST00000578922 SRSF12Q8WXF0 261 aaKnown RBP16.08■□□□□ 0.16
SMG8-203ENST00000578922 YTHDF2Q9Y5A9 579 aaKnown RBP16.08■□□□□ 0.16
SMG8-203ENST00000578922 NDUFA3O95167 84 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 AVPP01185 164 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 OCC1Q8TAD7 63 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 FAM103A1Q9BTL3 118 aaKnown RBP16.07■□□□□ 0.16
SMG8-203ENST00000578922 AURKAIP1Q9NWT8 199 aaPredicted RBP16.07■□□□□ 0.16
SMG8-203ENST00000578922 IGHV3-48P01763 117 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 FAM106CPP0CH98 169 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 IQCJQ1A5X6 159 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 C5orf64Q2M2E5 130 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 LINC01356Q8N9X3 169 aa16.07■□□□□ 0.16
SMG8-203ENST00000578922 A8MWP6 167 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 TEX22C9J3V5 150 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 INS-IGF2F8WCM5 200 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 BRS3P32247 399 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 Q8N6K4 173 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 Q96MF0 132 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 SEPSECSQ9HD40 501 aaKnown RBP16.06■□□□□ 0.16
SMG8-203ENST00000578922 ZNF600Q6ZNG1 722 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 MRPL41Q8IXM3 137 aaKnown RBP16.06■□□□□ 0.16
SMG8-203ENST00000578922 LRRC75A-AS1Q8N1F1 130 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 ZNF664Q8N3J9 261 aa16.06■□□□□ 0.16
SMG8-203ENST00000578922 PGPEP1LA6NFU8 196 aa16.05■□□□□ 0.16
SMG8-203ENST00000578922 TGFAP01135 160 aa16.05■□□□□ 0.16
SMG8-203ENST00000578922 EBI3Q14213 229 aa16.05■□□□□ 0.16
SMG8-203ENST00000578922 C19orf24Q9BVV8 132 aa16.05■□□□□ 0.16
SMG8-203ENST00000578922 TMEM167BQ9NRX6 74 aa16.05■□□□□ 0.16
SMG8-203ENST00000578922 IL36BQ9NZH7 164 aa16.05■□□□□ 0.16
SMG8-203ENST00000578922 SUB1P53999 127 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMG8-203ENST00000578922 FXYD3Q14802 87 aa16.04■□□□□ 0.16
SMG8-203ENST00000578922 SLC35E1Q96K37 410 aa16.04■□□□□ 0.16
SMG8-203ENST00000578922 SLC45A2Q9UMX9 530 aa16.04■□□□□ 0.16
SMG8-203ENST00000578922 ZNF705GA8MUZ8 300 aaPredicted RBP16.04■□□□□ 0.16
SMG8-203ENST00000578922 OR2T6Q8NHC8 308 aa16.04■□□□□ 0.16
SMG8-203ENST00000578922 MISP3Q96FF7 219 aa16.04■□□□□ 0.16
SMG8-203ENST00000578922 LINC00869P0C866 280 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 MFAP2P55001 183 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 SELENOTP62341 195 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 CD69Q07108 199 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 KLF17Q5JT82 389 aaPredicted RBP16.03■□□□□ 0.16
SMG8-203ENST00000578922 SPATA31B1PQ5VZV4 182 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 CCDC168Q8NDH2 2452 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 CSPG4Q6UVK1 2322 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 LOXL1Q08397 574 aaPredicted RBP16.03■□□□□ 0.16
SMG8-203ENST00000578922 NDUFAF3Q9BU61 184 aa16.03■□□□□ 0.16
SMG8-203ENST00000578922 FNDC4Q9H6D8 234 aaPredicted RBP16.03■□□□□ 0.16
SMG8-203ENST00000578922 PRRC2AP48634 2157 aaKnown RBP16.02■□□□□ 0.16
SMG8-203ENST00000578922 IGHV3-21A0A0B4J1V1 117 aa16.02■□□□□ 0.16
SMG8-203ENST00000578922 SSTP61278 116 aa16.02■□□□□ 0.16
SMG8-203ENST00000578922 CX3CL1P78423 397 aa16.02■□□□□ 0.16
SMG8-203ENST00000578922 ZNF90Q03938 601 aa16.02■□□□□ 0.16
SMG8-203ENST00000578922 TMEM219Q86XT9 240 aa16.02■□□□□ 0.16
SMG8-203ENST00000578922 KRTAP1-3Q8IUG1 177 aa16.02■□□□□ 0.16
SMG8-203ENST00000578922 TECRQ9NZ01 308 aaKnown RBP16.02■□□□□ 0.15
SMG8-203ENST00000578922 CREBBPQ92793 2442 aa16.01■□□□□ 0.15
SMG8-203ENST00000578922 RPL19P84098 196 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms