RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 OR2F1Q13607 317 aa13.08□□□□□ -0.32
CTDNEP1-207ENST00000572043 SPANXN5Q5MJ07 72 aa13.08□□□□□ -0.32
CTDNEP1-207ENST00000572043 LYG2Q86SG7 212 aa13.08□□□□□ -0.32
CTDNEP1-207ENST00000572043 GLMPQ8WWB7 406 aa13.08□□□□□ -0.32
CTDNEP1-207ENST00000572043 HELTA6NFD8 242 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 CA1P00915 261 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 EIF2B2P49770 351 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 LYZP61626 148 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 POLR2GP62487 172 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 RPP30P78346 268 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 EWSR1Q01844 656 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 STHQ8IWL8 128 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 DCANP1Q8TF63 244 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 CIB3Q96Q77 187 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 C7orf50Q9BRJ6 194 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-207ENST00000572043 PLA2G10O15496 165 aa13.06□□□□□ -0.32
CTDNEP1-207ENST00000572043 IFNA21P01568 189 aa13.06□□□□□ -0.32
CTDNEP1-207ENST00000572043 LCE6AA0A183 80 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 BUB3O43684 328 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 SCGB1D2O95969 90 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 SIGLEC15Q6ZMC9 328 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
CTDNEP1-207ENST00000572043 CXorf65A6NEN9 183 aa13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 LYRM1O43325 122 aa13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 SSSCA1O60232 199 aa13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 NKX2-1P43699 371 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 AP2S1P53680 142 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 OR4D5Q8NGN0 318 aa13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 RYR3Q15413 4870 aa13.04□□□□□ -0.32
CTDNEP1-207ENST00000572043 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 IGKV1OR2-108A0A075B7D4 117 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 SNRPGP15A8MWD9 76 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 FABP1P07148 127 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 ID3Q02535 119 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 AKR1C1Q04828 323 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 PPP1R14BQ96C90 147 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 TRGV9Q99603 122 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 RARRES2Q99969 163 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 PSENENQ9NZ42 101 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 GSKIPQ9P0R6 139 aa13.03□□□□□ -0.32
CTDNEP1-207ENST00000572043 TRAV6A0A075B6T7 132 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 SMCO3A2RU48 225 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 IAH1Q2TAA2 248 aaPredicted RBP13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 OR8G2PQ6IF36 304 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 ACOT7LQ6ZUV0 252 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 TRPT1Q86TN4 253 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 OR11H2Q8NH07 326 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 NRN1Q9NPD7 142 aa13.02□□□□□ -0.33
CTDNEP1-207ENST00000572043 CCSO14618 274 aa13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 GATA2P23769 480 aaPredicted RBP13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 THAP8Q8NA92 274 aa13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 GATAD1Q8WUU5 269 aa13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 PFDN2Q9UHV9 154 aa13.01□□□□□ -0.33
CTDNEP1-207ENST00000572043 DEFB4AO15263 64 aa13□□□□□ -0.33
CTDNEP1-207ENST00000572043 CCNKO75909 580 aa13□□□□□ -0.33
CTDNEP1-207ENST00000572043 TCRBP04435 133 aa13□□□□□ -0.33
CTDNEP1-207ENST00000572043 C4BPBP20851 252 aa13□□□□□ -0.33
CTDNEP1-207ENST00000572043 NUP62P37198 522 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-207ENST00000572043 SNRPD3P62318 126 aaKnown RBP13□□□□□ -0.33
CTDNEP1-207ENST00000572043 TMEM182Q6ZP80 229 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-207ENST00000572043 ZBTB8BQ8NAP8 495 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-207ENST00000572043 SEC22CQ9BRL7 303 aa13□□□□□ -0.33
CTDNEP1-207ENST00000572043 JTBO76095 146 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 METTL15P1P0C7V9 234 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 RRAS2P62070 204 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 CNPY1Q3B7I2 92 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 LINC00052Q96N35 136 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 CCDC32Q9BV29 185 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 NUDT15Q9NV35 164 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 CLEC5AQ9NY25 188 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 NBEAL2Q6ZNJ1 2754 aa12.99□□□□□ -0.33
CTDNEP1-207ENST00000572043 FAM25EA8MYX2 175 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 GIG44P09565 113 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 ORM2P19652 201 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 PAX9P55771 341 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 DEFB1P60022 68 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 OR1B1Q8NGR6 318 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
CTDNEP1-207ENST00000572043 PMS2P5A8MQ11 134 aa12.97□□□□□ -0.33
CTDNEP1-207ENST00000572043 SPP1P10451 314 aa12.97□□□□□ -0.33
CTDNEP1-207ENST00000572043 BPIFCQ8NFQ6 507 aa12.97□□□□□ -0.33
CTDNEP1-207ENST00000572043 DOK5Q9P104 306 aa12.97□□□□□ -0.33
CTDNEP1-207ENST00000572043 IGKV3-20P01619 116 aa12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 H2AFB2P0C5Z0 115 aa12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 C1orf194Q5T5A4 169 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms