RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GOSR1O95249 250 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 APOHP02749 345 aaPredicted RBP13.3□□□□□ -0.28
TPM1-228ENST00000560975 PAX2Q02962 417 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 POU2AF1Q16633 256 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 LINC01545Q5VT33 79 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 GTF2H5Q6ZYL4 71 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 SPOCK3Q9BQ16 436 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 DSCAMO60469 2012 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.3□□□□□ -0.28
TPM1-228ENST00000560975 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 KBTBD11-OT1A0A1B0GTJ5 212 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 ERHP84090 104 aaKnown RBP13.3□□□□□ -0.28
TPM1-228ENST00000560975 CR1LQ2VPA4 569 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 ADTRPQ96IZ2 230 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 PMS2CLQ68D20 193 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 UFSP1Q6NVU6 142 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 PRSS22Q9GZN4 317 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 RABAC1Q9UI14 185 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 TANC2Q9HCD6 1990 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 G3V4G9 280 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 SEC11AP67812 179 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 GUSBP1Q15486 140 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 OR8A1Q8NGG7 326 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 NEU4Q8WWR8 484 aaPredicted RBP13.29□□□□□ -0.28
TPM1-228ENST00000560975 ASCL2Q99929 193 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 MLST8Q9BVC4 326 aa13.29□□□□□ -0.28
TPM1-228ENST00000560975 KLRC4-KLRK1H3BQV0 150 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 CGB3P0DN86 165 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 CGB7P0DN87 165 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 ACP1P24666 158 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 MYCNOSP40205 109 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 CIARTQ8N365 385 aaPredicted RBP13.28□□□□□ -0.28
TPM1-228ENST00000560975 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.28□□□□□ -0.28
TPM1-228ENST00000560975 MAFAQ8NHW3 353 aaPredicted RBP13.28□□□□□ -0.28
TPM1-228ENST00000560975 C9orf118A6NHY6 69 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 COL8A1P27658 744 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 OR1N2Q8NGR9 330 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 CACNG8Q8WXS5 425 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 FLYWCH2Q96CP2 140 aaKnown RBP13.28□□□□□ -0.28
TPM1-228ENST00000560975 HARBI1Q96MB7 349 aa13.28□□□□□ -0.28
TPM1-228ENST00000560975 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 TCRBV4S1A1TA0A5B7 111 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 SPRY3O43610 288 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 FSTL3O95633 263 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 MSMPQ1L6U9 139 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 AP5S1Q9NUS5 200 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 ASPMQ8IZT6 3477 aa13.27□□□□□ -0.28
TPM1-228ENST00000560975 IGHV3-21A0A0B4J1V1 117 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 C19orf71A6NCJ1 209 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 NBEAP1P0C6P0 100 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 KIR3DS1Q14943 382 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 RUSC1-AS1Q66K80 236 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 ZNF747Q9BV97 191 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 NCOR1P1Q9H4R4 102 aa13.27□□□□□ -0.29
TPM1-228ENST00000560975 FAM106CPP0CH98 169 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 FAM106AQ4KMX7 169 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 C1orf185Q5T7R7 199 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 Q6ZT83 130 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 OR10AG1Q8NH19 301 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 TPPP3Q9BW30 176 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 NDUFA4L2Q9NRX3 87 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 A0A0G2JLM5 398 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 FXYD7P58549 80 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 NHLH1Q02575 133 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 KLF12Q9Y4X4 402 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 SOX21Q9Y651 276 aaPredicted RBP13.26□□□□□ -0.29
TPM1-228ENST00000560975 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 hADV38S2A0JD32 116 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 FA2HQ7L5A8 372 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 OR2K2Q8NGT1 345 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 MRPL20Q9BYC9 149 aaKnown RBP13.26□□□□□ -0.29
TPM1-228ENST00000560975 THYN1Q9P016 225 aa13.26□□□□□ -0.29
TPM1-228ENST00000560975 K7EP34 96 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 FAM87AP0C7U9 286 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 PRSS57Q6UWY2 283 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 SIT1Q9Y3P8 196 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 A6NDN8 102 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 H3BRM9 83 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 LTAP01374 205 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 APELAP0DMC3 54 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 TM4SF20Q53R12 229 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 PRNTQ86SH4 94 aa13.25□□□□□ -0.29
TPM1-228ENST00000560975 CIDEAO60543 219 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 TCRAP04437 139 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 ARMS2P0C7Q2 107 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 FGF6P10767 208 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 LOXL1Q08397 574 aaPredicted RBP13.24□□□□□ -0.29
TPM1-228ENST00000560975 PEAR1Q5VY43 1037 aaPredicted RBP13.24□□□□□ -0.29
TPM1-228ENST00000560975 Q9H3A6 140 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 DSCAML1Q8TD84 2053 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 C9orf172C9J069 976 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 ATP5IP56385 69 aaPredicted RBP13.24□□□□□ -0.29
TPM1-228ENST00000560975 CT83Q5H943 113 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 PERPQ96FX8 193 aa13.24□□□□□ -0.29
TPM1-228ENST00000560975 FMC1Q96HJ9 113 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1086.4 ms