RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PSG1P11464 419 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 TNFSF8P32971 234 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 TCTAP57738 103 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 RPP25LQ8N5L8 163 aaKnown RBP10.3□□□□□ -0.76
SNX6-210ENST00000557341 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 SOSTQ9BQB4 213 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 RBKSQ9H477 322 aa10.3□□□□□ -0.76
SNX6-210ENST00000557341 DUXBA0A1W2PPF3 345 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 C11orf94C9JXX5 98 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 BUB3O43684 328 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 ATP5IP56385 69 aaPredicted RBP10.29□□□□□ -0.76
SNX6-210ENST00000557341 AP3S2P59780 193 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 KLF9Q13886 244 aaPredicted RBP10.29□□□□□ -0.76
SNX6-210ENST00000557341 TMED4Q7Z7H5 227 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 OR51G1Q8NGK1 321 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 TRIM63Q969Q1 353 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 RNF125Q96EQ8 232 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 SLC35E1Q96K37 410 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 SEPSECSQ9HD40 501 aaKnown RBP10.29□□□□□ -0.76
SNX6-210ENST00000557341 PFDN2Q9UHV9 154 aa10.29□□□□□ -0.76
SNX6-210ENST00000557341 ZFP92A6NM28 416 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 DEDDO75618 318 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 RBMY1A1P0DJD3 496 aaKnown RBP10.28□□□□□ -0.76
SNX6-210ENST00000557341 RBMY1CP0DJD4 496 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 NUTF2P61970 127 aaKnown RBP10.28□□□□□ -0.76
SNX6-210ENST00000557341 RBMY1FQ15415 496 aaKnown RBP10.28□□□□□ -0.76
SNX6-210ENST00000557341 OR8G2PQ6IF36 304 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 TOMM5Q8N4H5 51 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 RAB40CQ96S21 281 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 PBDC1Q9BVG4 233 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 TBC1D24Q9ULP9 559 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 X6R8D5 127 aa10.28□□□□□ -0.76
SNX6-210ENST00000557341 FABP1P07148 127 aa10.27□□□□□ -0.77
SNX6-210ENST00000557341 VAMP1P23763 118 aa10.27□□□□□ -0.77
SNX6-210ENST00000557341 GPX4P36969 197 aaPredicted RBP10.27□□□□□ -0.77
SNX6-210ENST00000557341 TMEM128Q5BJH2 165 aa10.27□□□□□ -0.77
SNX6-210ENST00000557341 CENPSQ8N2Z9 138 aa10.27□□□□□ -0.77
SNX6-210ENST00000557341 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
SNX6-210ENST00000557341 VPS13DQ5THJ4 4388 aa10.27□□□□□ -0.77
SNX6-210ENST00000557341 GAMTQ14353 236 aa10.26□□□□□ -0.77
SNX6-210ENST00000557341 PYDC2Q56P42 97 aa10.26□□□□□ -0.77
SNX6-210ENST00000557341 DEDD2Q8WXF8 326 aa10.26□□□□□ -0.77
SNX6-210ENST00000557341 IGKV1D-37A0A075B6S9 117 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 IGLL5B9A064 214 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 H3BMM0 161 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 PITX3O75364 302 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 SLC25A6P12236 298 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 HLA-DRB4P13762 266 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 HLA-DMBP28068 263 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 NKX2-1P43699 371 aaPredicted RBP10.25□□□□□ -0.77
SNX6-210ENST00000557341 LYZP61626 148 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 RAB11AP62491 216 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 ZNF90Q03938 601 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 Q6ZTC4 211 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 LRTM2Q8N967 370 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 SLC25A21Q9BQT8 299 aaPredicted RBP10.25□□□□□ -0.77
SNX6-210ENST00000557341 V9GYH0 126 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 HLA-DRB4X5D2U9 266 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 DNAH6Q9C0G6 4158 aa10.25□□□□□ -0.77
SNX6-210ENST00000557341 ELOA3CA0A087WX78 387 aaPredicted RBP10.24□□□□□ -0.77
SNX6-210ENST00000557341 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 MED6O75586 246 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 IAPPP10997 89 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 S100A5P33763 92 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 ZNF79Q15937 498 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 CIB3Q96Q77 187 aaPredicted RBP10.24□□□□□ -0.77
SNX6-210ENST00000557341 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
SNX6-210ENST00000557341 APLNQ9ULZ1 77 aa10.24□□□□□ -0.77
SNX6-210ENST00000557341 DNAH10Q8IVF4 4471 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 CCDC160A6NGH7 325 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 SNRPGP15A8MWD9 76 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 ID1P41134 155 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 PSMB3P49720 205 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 COQ8AQ8NI60 647 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 PPP1R14BQ96C90 147 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 TRGV9Q99603 122 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
SNX6-210ENST00000557341 TMED3Q9Y3Q3 217 aa10.23□□□□□ -0.77
SNX6-210ENST00000557341 SFT2D2O95562 160 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 RPP30P78346 268 aaKnown RBP10.22□□□□□ -0.77
SNX6-210ENST00000557341 PRR20EP86478 221 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 PRR20CP86479 221 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 PRR20DP86480 221 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 PRR20BP86481 221 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 PRR20AP86496 221 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 PPP1R1AQ13522 171 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 OR2F1Q13607 317 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 GDF5OSQ5U4N7 250 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 THAP8Q8NA92 274 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 LINC00052Q96N35 136 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 SAV1Q9H4B6 383 aaPredicted RBP10.22□□□□□ -0.77
SNX6-210ENST00000557341 CELA1Q9UNI1 258 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 HECTD4Q9Y4D8 3996 aa10.22□□□□□ -0.77
SNX6-210ENST00000557341 IGHV4-4A0A075B6R2 117 aa10.21□□□□□ -0.77
SNX6-210ENST00000557341 IGKV1OR2-108A0A075B7D4 117 aa10.21□□□□□ -0.77
SNX6-210ENST00000557341 SOCS3O14543 225 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms