RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
GPHN-211ENST00000556020 RNF125Q96EQ8 232 aa12.54□□□□□ -0.4
GPHN-211ENST00000556020 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
GPHN-211ENST00000556020 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 C4BPBP20851 252 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 ZNF90Q03938 601 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 PPP1R1AQ13522 171 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 GAMTQ14353 236 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 MORN3Q6PF18 240 aaPredicted RBP12.53□□□□□ -0.4
GPHN-211ENST00000556020 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 CLEC5AQ9NY25 188 aa12.53□□□□□ -0.4
GPHN-211ENST00000556020 FAM90A26D6RGX4 464 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 BUB3O43684 328 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 PITX3O75364 302 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 HOXB5P09067 269 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 GIG44P09565 113 aaPredicted RBP12.52□□□□□ -0.41
GPHN-211ENST00000556020 SPP1P10451 314 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 GPX4P36969 197 aaPredicted RBP12.52□□□□□ -0.41
GPHN-211ENST00000556020 OR2F1Q13607 317 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 SLC25A21Q9BQT8 299 aaPredicted RBP12.52□□□□□ -0.41
GPHN-211ENST00000556020 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
GPHN-211ENST00000556020 IGKV1D-37A0A075B6S9 117 aa12.51□□□□□ -0.41
GPHN-211ENST00000556020 SFT2D2O95562 160 aa12.51□□□□□ -0.41
GPHN-211ENST00000556020 INPP1P49441 399 aa12.51□□□□□ -0.41
GPHN-211ENST00000556020 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
GPHN-211ENST00000556020 LYZP61626 148 aa12.51□□□□□ -0.41
GPHN-211ENST00000556020 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
GPHN-211ENST00000556020 RAB11AP62491 216 aa12.51□□□□□ -0.41
GPHN-211ENST00000556020 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
GPHN-211ENST00000556020 RBM38Q9H0Z9 239 aaKnown RBP12.51□□□□□ -0.41
GPHN-211ENST00000556020 IGHV4-28A0A0C4DH34 117 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 WRBO00258 174 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 MED6O75586 246 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 GSG1LQ6UXU4 331 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 Q8NAQ8 132 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 PPP1R14BQ96C90 147 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
GPHN-211ENST00000556020 LINC00854A0A1B0GVQ3 168 aa12.49□□□□□ -0.41
GPHN-211ENST00000556020 FABP1P07148 127 aa12.49□□□□□ -0.41
GPHN-211ENST00000556020 NUP62P37198 522 aaPredicted RBP12.49□□□□□ -0.41
GPHN-211ENST00000556020 SRRQ9GZT4 340 aa12.49□□□□□ -0.41
GPHN-211ENST00000556020 PFDN2Q9UHV9 154 aa12.49□□□□□ -0.41
GPHN-211ENST00000556020 BIRC6Q9NR09 4857 aa12.49□□□□□ -0.41
GPHN-211ENST00000556020 SYNGR2O43760 224 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 RBMY1A1P0DJD3 496 aaKnown RBP12.48□□□□□ -0.41
GPHN-211ENST00000556020 RBMY1CP0DJD4 496 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 SLC25A6P12236 298 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 DEFB1P60022 68 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 RBMY1FQ15415 496 aaKnown RBP12.48□□□□□ -0.41
GPHN-211ENST00000556020 GGNBP1Q5YKI7 109 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 OR8G2PQ6IF36 304 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 DEDD2Q8WXF8 326 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 LINC00052Q96N35 136 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 TBC1D24Q9ULP9 559 aa12.48□□□□□ -0.41
GPHN-211ENST00000556020 SNRPGP15A8MWD9 76 aa12.47□□□□□ -0.41
GPHN-211ENST00000556020 H3BP45 60 aa12.47□□□□□ -0.41
GPHN-211ENST00000556020 RPP30P78346 268 aaKnown RBP12.47□□□□□ -0.41
GPHN-211ENST00000556020 BAK1Q16611 211 aa12.47□□□□□ -0.41
GPHN-211ENST00000556020 SPANXN5Q5MJ07 72 aa12.47□□□□□ -0.41
GPHN-211ENST00000556020 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
GPHN-211ENST00000556020 WDR12Q9GZL7 423 aaKnown RBP12.47□□□□□ -0.41
GPHN-211ENST00000556020 XCL2Q9UBD3 114 aa12.47□□□□□ -0.41
GPHN-211ENST00000556020 X6R8D5 127 aa12.47□□□□□ -0.41
GPHN-211ENST00000556020 DEDDO75618 318 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 ADAP1O75689 374 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 MIFP14174 115 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
GPHN-211ENST00000556020 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 TRGV9Q99603 122 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 FLVCR2Q9UPI3 526 aa12.46□□□□□ -0.41
GPHN-211ENST00000556020 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 C9orf170A2RU37 121 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 ZNF705EA8MWA4 302 aaPredicted RBP12.45□□□□□ -0.42
GPHN-211ENST00000556020 H3BMM0 161 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 ZNF701M0R085 212 aaPredicted RBP12.45□□□□□ -0.42
GPHN-211ENST00000556020 ID1P41134 155 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 NUTF2P61970 127 aaKnown RBP12.45□□□□□ -0.42
GPHN-211ENST00000556020 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 OR8I2Q8N0Y5 310 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 CSNK1G2-AS1Q8NCQ2 148 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 COQ8AQ8NI60 647 aa12.45□□□□□ -0.42
GPHN-211ENST00000556020 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
GPHN-211ENST00000556020 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
GPHN-211ENST00000556020 NAP1L6A6NFF2 107 aa12.44□□□□□ -0.42
GPHN-211ENST00000556020 IGLL5B9A064 214 aa12.44□□□□□ -0.42
GPHN-211ENST00000556020 NDUFB6O95139 128 aa12.44□□□□□ -0.42
GPHN-211ENST00000556020 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
GPHN-211ENST00000556020 GATA2P23769 480 aaPredicted RBP12.44□□□□□ -0.42
GPHN-211ENST00000556020 HLA-DMBP28068 263 aa12.44□□□□□ -0.42
GPHN-211ENST00000556020 FXYD7P58549 80 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms