RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 YIF1AO95070 293 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 S100A8P05109 93 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 LINC00869P0C866 280 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 SMIM6P0DI80 62 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 GPR183P32249 361 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 SULT1A2P50226 295 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 RAB2AP61019 212 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 TEX38Q6PEX7 206 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 FAM223AQ8IWN6 122 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 SVBPQ8N300 66 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 KLHDC1Q8N7A1 406 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 LINC01006Q8NI28 216 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 EEF1AKMT3Q96AZ1 226 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 NARS2Q96I59 477 aaKnown RBP7.91□□□□□ -1.14
SRP54-208ENST00000555557 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 RPRMQ9NS64 109 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 ZNF705EA8MWA4 302 aaPredicted RBP7.91□□□□□ -1.14
SRP54-208ENST00000555557 BRI3O95415 125 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 TSPAN15O95858 294 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 TRBV12-3P01733 135 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 CTSGP08311 255 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 RPL29P47914 159 aaKnown RBP7.91□□□□□ -1.14
SRP54-208ENST00000555557 SSTP61278 116 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 RPL15P61313 204 aaKnown RBP7.91□□□□□ -1.14
SRP54-208ENST00000555557 SERF2P84101 59 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 PRR20EP86478 221 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 PRR20CP86479 221 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 PRR20DP86480 221 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 PRR20BP86481 221 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 PRR20AP86496 221 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 KIAA0141Q14154 515 aaPredicted RBP7.91□□□□□ -1.14
SRP54-208ENST00000555557 SFT2D1Q8WV19 159 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 RNF141Q8WVD5 230 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 TRGV9Q99603 122 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 SLC39A9Q9NUM3 307 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 NIPBLQ6KC79 2804 aaeCLIP7.9□□□□□ -1.14
SRP54-208ENST00000555557 PPP5D1E7EU14 171 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 PSG1P11464 419 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 ADMP35318 185 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 ZNF616Q08AN1 781 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 C11orf44Q8N8P7 122 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 OR5AU1Q8NGC0 362 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 FAM213BQ8TBF2 198 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 USMG5Q96IX5 58 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 C16orf95Q9H693 158 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 DOK5Q9P104 306 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 JMJD1CQ15652 2540 aa7.9□□□□□ -1.14
SRP54-208ENST00000555557 TRBV7-1A0A0A6YYK4 115 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 RAB19A4D1S5 217 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 ELANEP08246 267 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 RD3LP0DJH9 198 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 S100PP25815 95 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 FOXE3Q13461 319 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 TMEM41BQ5BJD5 291 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 TCTEX1D4Q5JR98 221 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 Q6ZRG5 221 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 SSX7Q7RTT5 188 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 RPP25LQ8N5L8 163 aaKnown RBP7.9□□□□□ -1.15
SRP54-208ENST00000555557 OR4X2Q8NGF9 303 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 OR10G4Q8NGN3 311 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 OR10G9Q8NGN4 311 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 OR10G7Q8NGN6 311 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 TXN2Q99757 166 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 GNB4Q9HAV0 340 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 GSN-AS1Q9NRJ2 163 aa7.9□□□□□ -1.15
SRP54-208ENST00000555557 DNHD1Q96M86 4753 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 IGHV3OR16-8A0A075B7F1 116 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 A0A0G2JLM5 398 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 A0A1B0GV50 99 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 UMAD1C9J7I0 102 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 HMGB3O15347 200 aaKnown RBP7.89□□□□□ -1.15
SRP54-208ENST00000555557 ORM2P19652 201 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 FCGR2BP31994 310 aaPredicted RBP7.89□□□□□ -1.15
SRP54-208ENST00000555557 ZNF726P1Q15940 193 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 C18orf65Q6ZTR6 163 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 ZNF491Q8N8L2 437 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 TMEM37Q8WXS4 190 aa7.89□□□□□ -1.15
SRP54-208ENST00000555557 SEPSECSQ9HD40 501 aaKnown RBP7.89□□□□□ -1.15
SRP54-208ENST00000555557 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 TMEM218A2RU14 115 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 TMEM89A2RUT3 159 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 TGOLN2O43493 480 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 RAB5CP51148 216 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 LYZP61626 148 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 SELENOTP62341 195 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 ACOT6Q3I5F7 207 aaPredicted RBP7.88□□□□□ -1.15
SRP54-208ENST00000555557 SPATA31B1PQ5VZV4 182 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 OR1B1Q8NGR6 318 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 ZNF414Q96IQ9 312 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 UHRF2Q96PU4 802 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 TCEAL7Q9BRU2 100 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 OR51M1Q9H341 326 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 SLC25A22Q9H936 323 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.88□□□□□ -1.15
SRP54-208ENST00000555557 NUDT19A8MXV4 375 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 NDUFA7O95182 113 aa7.88□□□□□ -1.15
SRP54-208ENST00000555557 TOMM40O96008 361 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms