RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 GREB1Q4ZG55 1949 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 PRORSD1PA6NEY8 169 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 SDCBPO00560 298 aaPredicted RBP1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 CST8O60676 142 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 NFYBP25208 207 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 DYNLT1P63172 113 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 BCL2L15Q5TBC7 163 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 Q6ZRN7 208 aaPredicted RBP1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 OR4D11Q8NGI4 311 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 CARD19Q96LW7 228 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 YPEL2Q96QA6 119 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 YIPF3Q9GZM5 350 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 C8orf4Q9NR00 106 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 OR52A1Q9UKL2 312 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 STRCQ7RTU9 1775 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 RIMBP3CA6NJZ7 1639 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 RIMBP3BA6NNM3 1639 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 RIMBP3Q9UFD9 1639 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 PLXND1Q9Y4D7 1925 aa1.76□□□□□ -2.13
LSM6P2-201ENST00000552208 CD109Q6YHK3 1445 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 TRGV10A0A0A0MS01 117 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 TLCD2A6NGC4 264 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 OR2T1O43869 369 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 OGNP20774 298 aaKnown RBP1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 ZNF846Q147U1 533 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 TOMM20LQ6UXN7 152 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 SOSTDC1Q6X4U4 206 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 PDZD9Q8IXQ8 264 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 TEX47Q8TBZ9 253 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 RMND5BQ96G75 393 aaPredicted RBP1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 PRADC1Q9BSG0 188 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 NHP2Q9NX24 153 aaKnown RBP1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 TAS2R4Q9NYW5 299 aa1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 ZCCHC11Q5TAX3 1644 aaKnown RBP1.75□□□□□ -2.13
LSM6P2-201ENST00000552208 MIFP14174 115 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 GPX2P18283 190 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 DYNLT3P51808 116 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 DEFB103AP81534 67 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 Q1T7F1 81 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 BRMS1LQ5PSV4 323 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 FKBP1CQ5VVH2 108 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 OR2T10Q8NGZ9 312 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 LRTM1Q9HBL6 345 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 ARHGEF28Q8N1W1 1705 aaKnown RBP1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 HIVEP2P31629 2446 aa1.74□□□□□ -2.13
LSM6P2-201ENST00000552208 ECM29Q5VYK3 1845 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 NDUFB3O43676 98 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 IFNA14P01570 189 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 SPANXN5Q5MJ07 72 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 C1orf140Q5VVS0 124 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 PATE2Q6UY27 113 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 PRR15Q8IV56 129 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 SLC30A7Q8NEW0 376 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 DYDC1Q8WWB3 177 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 MBD3L1Q8WWY6 194 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 BCL2L10Q9HD36 194 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 BAHCC1Q9P281 2608 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 DENND4CQ5VZ89 1909 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 TECPR2O15040 1411 aa1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 COL5A1P20908 1838 aaPredicted RBP1.73□□□□□ -2.13
LSM6P2-201ENST00000552208 NUMA1Q14980 2115 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 CAMSAP2Q08AD1 1489 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 MEIKINA0A087WXM9 373 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 TRAV1-1A0A0B4J248 108 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 E7EQ34 232 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 H7BYZ3 331 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 ASAH2BP0C7U1 165 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 RHOGP84095 191 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 ELOBQ15370 118 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 ALX1Q15699 326 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 ESRGQ1W209 222 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 TMEM128Q5BJH2 165 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 Q8IYB0 196 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 ZNF418Q8TF45 676 aaPredicted RBP1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 THEM6Q8WUY1 208 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 SLC50A1Q9BRV3 221 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 EFCAB11Q9BUY7 163 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 CST9LQ9H4G1 147 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 POPDC3Q9HBV1 291 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 C19orf12Q9NSK7 152 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 MED11Q9P086 117 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 HS3ST2Q9Y278 367 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 ASB4Q9Y574 426 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 NUBP2Q9Y5Y2 271 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 STRCP1A6NGW2 1772 aa1.72□□□□□ -2.13
LSM6P2-201ENST00000552208 HEATR5AQ86XA9 2040 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 NCAPD3P42695 1498 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 CEP164Q9UPV0 1460 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 MYH11P35749 1972 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 LOC105371267A0A1B0GV96 52 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 TRDV1A0A1B0GX56 115 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 TSTD3H0UI37 97 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 CXCL1P09341 107 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 BAALC-AS2P0C853 105 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 HLA-EP13747 358 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 PLCXD2Q0VAA5 305 aa1.71□□□□□ -2.14
LSM6P2-201ENST00000552208 SURF2Q15527 256 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms