RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 MIFP14174 115 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 C4BPBP20851 252 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 FAUP35544 74 aaKnown RBP10.45□□□□□ -0.74
COL2A1-209ENST00000546974 GPX4P36969 197 aaPredicted RBP10.45□□□□□ -0.74
COL2A1-209ENST00000546974 TCTAP57738 103 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 C2CD4CQ8TF44 421 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 RAB40CQ96S21 281 aa10.45□□□□□ -0.74
COL2A1-209ENST00000546974 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 AP3S2P59780 193 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 SNRPD3P62318 126 aaKnown RBP10.44□□□□□ -0.74
COL2A1-209ENST00000546974 KLF9Q13886 244 aaPredicted RBP10.44□□□□□ -0.74
COL2A1-209ENST00000546974 PSMG4Q5JS54 123 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 SIGLEC15Q6ZMC9 328 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 CSNK1G2-AS1Q8NCQ2 148 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 OR51G1Q8NGK1 321 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
COL2A1-209ENST00000546974 IGHV4-28A0A0C4DH34 117 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 C11orf94C9JXX5 98 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 RBMY1A1P0DJD3 496 aaKnown RBP10.43□□□□□ -0.74
COL2A1-209ENST00000546974 RBMY1CP0DJD4 496 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 NUP62P37198 522 aaPredicted RBP10.43□□□□□ -0.74
COL2A1-209ENST00000546974 GAMTQ14353 236 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
COL2A1-209ENST00000546974 TMEM128Q5BJH2 165 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 OR1S1Q8NH92 325 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 TRIM63Q969Q1 353 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 RNF125Q96EQ8 232 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 PFDN2Q9UHV9 154 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 X6R8D5 127 aa10.43□□□□□ -0.74
COL2A1-209ENST00000546974 IGKV1D-37A0A075B6S9 117 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 PITX3O75364 302 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 NUTF2P61970 127 aaKnown RBP10.42□□□□□ -0.74
COL2A1-209ENST00000546974 PYDC2Q56P42 97 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 OR8G2PQ6IF36 304 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 TOMM5Q8N4H5 51 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 RPP25LQ8N5L8 163 aaKnown RBP10.42□□□□□ -0.74
COL2A1-209ENST00000546974 LRTM2Q8N967 370 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 DEDD2Q8WXF8 326 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 SLC35E1Q96K37 410 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 TBC1D24Q9ULP9 559 aa10.42□□□□□ -0.74
COL2A1-209ENST00000546974 ZFP92A6NM28 416 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 H3BMM0 161 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 DEDDO75618 318 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 SLC25A6P12236 298 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 NKX2-1P43699 371 aaPredicted RBP10.41□□□□□ -0.74
COL2A1-209ENST00000546974 RAB11AP62491 216 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 TMED4Q7Z7H5 227 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 SLC25A21Q9BQT8 299 aaPredicted RBP10.41□□□□□ -0.74
COL2A1-209ENST00000546974 PBDC1Q9BVG4 233 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 C1QTNF4Q9BXJ3 329 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 CLEC5AQ9NY25 188 aa10.41□□□□□ -0.74
COL2A1-209ENST00000546974 ELOA3CA0A087WX78 387 aaPredicted RBP10.4□□□□□ -0.74
COL2A1-209ENST00000546974 FABP1P07148 127 aa10.4□□□□□ -0.74
COL2A1-209ENST00000546974 ZNF90Q03938 601 aa10.4□□□□□ -0.74
COL2A1-209ENST00000546974 APLNQ9ULZ1 77 aa10.4□□□□□ -0.74
COL2A1-209ENST00000546974 TMED3Q9Y3Q3 217 aa10.4□□□□□ -0.74
COL2A1-209ENST00000546974 V9GYH0 126 aa10.4□□□□□ -0.74
COL2A1-209ENST00000546974 DNAH17Q9UFH2 4485 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 SNRPGP15A8MWD9 76 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 IGLL5B9A064 214 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 MED6O75586 246 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 IAPPP10997 89 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 S100A5P33763 92 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 ZNF79Q15937 498 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 CENPSQ8N2Z9 138 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 TRGV9Q99603 122 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
COL2A1-209ENST00000546974 DNAH2Q9P225 4427 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 TRAV10A0A0B4J240 114 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 SFT2D2O95562 160 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 VAMP1P23763 118 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 ID1P41134 155 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 LYZP61626 148 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 RPP30P78346 268 aaKnown RBP10.38□□□□□ -0.75
COL2A1-209ENST00000546974 Q6ZTC4 211 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 THAP8Q8NA92 274 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 CIB3Q96Q77 187 aaPredicted RBP10.38□□□□□ -0.75
COL2A1-209ENST00000546974 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
COL2A1-209ENST00000546974 CFDP00746 253 aaPredicted RBP10.37□□□□□ -0.75
COL2A1-209ENST00000546974 PSMB3P49720 205 aa10.37□□□□□ -0.75
COL2A1-209ENST00000546974 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
COL2A1-209ENST00000546974 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
COL2A1-209ENST00000546974 WDR12Q9GZL7 423 aaKnown RBP10.37□□□□□ -0.75
COL2A1-209ENST00000546974 RBM38Q9H0Z9 239 aaKnown RBP10.37□□□□□ -0.75
COL2A1-209ENST00000546974 SAV1Q9H4B6 383 aaPredicted RBP10.37□□□□□ -0.75
COL2A1-209ENST00000546974 FAT2Q9NYQ8 4349 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 IGKV1OR2-108A0A075B7D4 117 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 CCDC160A6NGH7 325 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 SOCS3O14543 225 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 SYNGR2O43760 224 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 OR2F1Q13607 317 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 GDF5OSQ5U4N7 250 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 FOXI2Q6ZQN5 318 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 PPP1R14BQ96C90 147 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 LINC00052Q96N35 136 aa10.36□□□□□ -0.75
COL2A1-209ENST00000546974 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms