RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 KDM5AP29375 1690 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 CASP8AP2Q9UKL3 1982 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 DIDO1Q9BTC0 2240 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 PREX2Q70Z35 1606 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ABCA5Q8WWZ7 1642 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 INTS1Q8N201 2190 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 A0A0D9SEW6 157 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 DPRXA6NFQ7 191 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 FAM159BA6NKW6 160 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 J3QQQ9 107 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 PGLYRP1O75594 196 aaPredicted RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 CRYZL1O95825 349 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 SERPINE1P05121 402 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 MSMBP08118 114 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 G6PCP35575 357 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ZNF80P51504 273 aaPredicted RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 AQP4P55087 323 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 RPL26P61254 145 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 ARF6P62330 175 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 SUPT4H1P63272 117 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 DEFB103AP81534 67 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ERHP84090 104 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 FAM27BQ5VT28 67 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 RPL22L1Q6P5R6 122 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 GDPD1Q8N9F7 314 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 C9orf163Q8N9P6 203 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 OR52R1Q8NGF1 315 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 OR51A2Q8NGJ7 313 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 RNASE11Q8TAA1 199 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 RASSF5Q8WWW0 418 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 CMSS1Q9BQ75 279 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 CCDC94Q9BW85 323 aaPredicted RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 COMMD5Q9GZQ3 224 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 RPL26L1Q9UNX3 145 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 CYSLTR1Q9Y271 337 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 SAMHD1Q9Y3Z3 626 aaKnown RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 AMMECR1Q9Y4X0 333 aaPredicted RBP1.23□□□□□ -2.21
CD44-234ENST00000531873 IGSF10Q6WRI0 2623 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ERVK-7P63135 1459 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 RICTORQ6R327 1708 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 SCN8AQ9UQD0 1980 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 HFM1A2PYH4 1435 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ZNF609O15014 1411 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 TECPR2O15040 1411 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 PPIP5K1Q6PFW1 1433 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 MROH2AA6NES4 1674 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 RREB1Q92766 1687 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 ITSN2Q9NZM3 1697 aa1.23□□□□□ -2.21
CD44-234ENST00000531873 USP32Q8NFA0 1604 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 LAMA3Q16787 3333 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 KIF1BO60333 1816 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 TLN1Q9Y490 2541 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 MAP1BP46821 2468 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 RIF1Q5UIP0 2472 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 PRRC2BQ5JSZ5 2229 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 TRAV9-1A0A075B6T8 112 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 IRGMA1A4Y4 181 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 OR51F1A6NGY5 319 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 BUB1B-PAK6H3BSN5 160 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 PIRO00625 290 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 SLC22A1O15245 554 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 OR2J2O76002 312 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 NAPSAO96009 420 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 RPS4Y1P22090 263 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 PSMD8P48556 350 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 EMP1P54849 157 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 HIST1H4AP62805 103 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 GLO1Q04760 184 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 SLC38A11Q08AI6 406 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 MOGQ16653 247 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 HACD4Q5VWC8 232 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 TEX36Q5VZQ5 186 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 OOSP2Q86WS3 158 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 TERB2Q8NHR7 220 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 NMNAT1Q9HAN9 279 aaPredicted RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 NCOR1O75376 2440 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 TNS1Q9HBL0 1735 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 ADGRL2O95490 1459 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 NRXN1Q9ULB1 1477 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 CROCC2H7BZ55 1655 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 TNRC6CQ9HCJ0 1690 aaKnown RBP1.22□□□□□ -2.21
CD44-234ENST00000531873 NBEAL2Q6ZNJ1 2754 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 ECM29Q5VYK3 1845 aa1.22□□□□□ -2.21
CD44-234ENST00000531873 EML6Q6ZMW3 1958 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 STAB1Q9NY15 2570 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 UGGT2Q9NYU1 1516 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 MTORP42345 2549 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 CCDC168Q8NDH2 2452 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 hCG_1818297A0A087WSY0 165 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 TRBV10-2A0A0K0K1G8 114 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 A8MT66 165 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 ZNF737O75373 536 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 C1QCP02747 245 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 CLPSP04118 112 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 RBP1P09455 135 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 DEFA3P59666 94 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 CDC42P60953 191 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 TMEM258P61165 79 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 TMED2Q15363 201 aa1.21□□□□□ -2.22
CD44-234ENST00000531873 LIN52Q52LA3 116 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms