RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LYZL2Q7Z4W2 148 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 LGI3Q8N145 548 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 SOSTQ9BQB4 213 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 RBKSQ9H477 322 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 NRN1Q9NPD7 142 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 CLEC5AQ9NY25 188 aa12.19□□□□□ -0.46
CPSF1-207ENST00000531727 IGLL5B9A064 214 aa12.18□□□□□ -0.46
CPSF1-207ENST00000531727 SRPXP78539 464 aa12.18□□□□□ -0.46
CPSF1-207ENST00000531727 OR51G1Q8NGK1 321 aa12.18□□□□□ -0.46
CPSF1-207ENST00000531727 SLIRPQ9GZT3 109 aaKnown RBP12.18□□□□□ -0.46
CPSF1-207ENST00000531727 TBC1D24Q9ULP9 559 aa12.18□□□□□ -0.46
CPSF1-207ENST00000531727 APLNQ9ULZ1 77 aa12.18□□□□□ -0.46
CPSF1-207ENST00000531727 ELOA3CA0A087WX78 387 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-207ENST00000531727 FABP12A6NFH5 140 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 ANXA3P12429 323 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 HLA-DMBP28068 263 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 TNFSF8P32971 234 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-207ENST00000531727 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-207ENST00000531727 PRR20EP86478 221 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 PRR20CP86479 221 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 PRR20DP86480 221 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 PRR20BP86481 221 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 PRR20AP86496 221 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 KLF9Q13886 244 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-207ENST00000531727 VPS13DQ5THJ4 4388 aa12.17□□□□□ -0.46
CPSF1-207ENST00000531727 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
CPSF1-207ENST00000531727 NOL3O60936 208 aaKnown RBP12.16□□□□□ -0.46
CPSF1-207ENST00000531727 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
CPSF1-207ENST00000531727 NUTF2P61970 127 aaKnown RBP12.16□□□□□ -0.46
CPSF1-207ENST00000531727 Q6ZTC4 211 aa12.16□□□□□ -0.46
CPSF1-207ENST00000531727 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
CPSF1-207ENST00000531727 C1QTNF4Q9BXJ3 329 aa12.16□□□□□ -0.46
CPSF1-207ENST00000531727 DNAH10Q8IVF4 4471 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 ZFP92A6NM28 416 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 H3BMM0 161 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 H3BMQ9 156 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 OR8G2PQ6IF36 304 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 CENPSQ8N2Z9 138 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 MCFD2Q8NI22 146 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 PBDC1Q9BVG4 233 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 PFDN2Q9UHV9 154 aa12.15□□□□□ -0.46
CPSF1-207ENST00000531727 IGKV1D-37A0A075B6S9 117 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 DUXBA0A1W2PPF3 345 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 FAUP35544 74 aaKnown RBP12.14□□□□□ -0.47
CPSF1-207ENST00000531727 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-207ENST00000531727 ZNF90Q03938 601 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 GAMTQ14353 236 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 XCL2Q9UBD3 114 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
CPSF1-207ENST00000531727 PITX3O75364 302 aa12.13□□□□□ -0.47
CPSF1-207ENST00000531727 TMED4Q7Z7H5 227 aa12.13□□□□□ -0.47
CPSF1-207ENST00000531727 TRIM63Q969Q1 353 aa12.13□□□□□ -0.47
CPSF1-207ENST00000531727 CELA1Q9UNI1 258 aa12.13□□□□□ -0.47
CPSF1-207ENST00000531727 HECTD4Q9Y4D8 3996 aa12.13□□□□□ -0.47
CPSF1-207ENST00000531727 IGHV4-4A0A075B6R2 117 aa12.12□□□□□ -0.47
CPSF1-207ENST00000531727 FABP1P07148 127 aa12.12□□□□□ -0.47
CPSF1-207ENST00000531727 AP3S2P59780 193 aa12.12□□□□□ -0.47
CPSF1-207ENST00000531727 TMEM128Q5BJH2 165 aa12.12□□□□□ -0.47
CPSF1-207ENST00000531727 C1orf194Q5T5A4 169 aa12.12□□□□□ -0.47
CPSF1-207ENST00000531727 IAPPP10997 89 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 SLC25A6P12236 298 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 LYZP61626 148 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 RAB11AP62491 216 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 PYDC2Q56P42 97 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 GDF5OSQ5U4N7 250 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 TOMM5Q8N4H5 51 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 LRTM2Q8N967 370 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 RNF126Q9BV68 326 aa12.11□□□□□ -0.47
CPSF1-207ENST00000531727 WDR12Q9GZL7 423 aaKnown RBP12.11□□□□□ -0.47
CPSF1-207ENST00000531727 SNRPGP15A8MWD9 76 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 VAMP1P23763 118 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 ID1P41134 155 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 PSMB3P49720 205 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-207ENST00000531727 LINC00052Q96N35 136 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 NEU1Q99519 415 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 TRGV9Q99603 122 aa12.1□□□□□ -0.47
CPSF1-207ENST00000531727 SAV1Q9H4B6 383 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-207ENST00000531727 DEFB131BA0A096LNP1 70 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 SOCS3O14543 225 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 MED6O75586 246 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 DEFB1P60022 68 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 OR2F1Q13607 317 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 FOXI2Q6ZQN5 318 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 ZNF767PQ75MW2 155 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 THAP8Q8NA92 274 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 SLC25A21Q9BQT8 299 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-207ENST00000531727 V9GYH0 126 aa12.09□□□□□ -0.47
CPSF1-207ENST00000531727 IGKV1OR2-108A0A075B7D4 117 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 ZNF705FA8MVS1 300 aaPredicted RBP12.08□□□□□ -0.48
CPSF1-207ENST00000531727 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 AMBPP02760 352 aa12.08□□□□□ -0.48
CPSF1-207ENST00000531727 ZNF705DP0CH99 300 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms