RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CPMP14384 443 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 PSMB8P28062 276 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 MAGEA5P43359 124 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 PPICP45877 212 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 GNB2P62879 340 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 HERVK_113P63121 156 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 LOXL1Q08397 574 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF141Q15928 474 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 DMRTC1Q5HYR2 192 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 SLC48A1Q6P1K1 146 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 TMEM14EPQ6UXP3 125 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 VKORC1L1Q8N0U8 176 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 OR4K13Q8NH42 304 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 OR9G1Q8NH87 305 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 OSR1Q8TAX0 266 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 PPP1R1CQ8WVI7 109 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 RBMXL1Q96E39 390 aaKnown RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 WDYHV1Q96HA8 205 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 Q96MF0 132 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF442Q9H7R0 627 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 DEPPQ9NTK1 212 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 TMED7Q9Y3B3 224 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 CHCHD2Q9Y6H1 151 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-216ENST00000523088 PXMP4Q9Y6I8 212 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 LRBAP50851 2863 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 DOCK7Q96N67 2140 aa6.13□□□□□ -1.43
HDAC3-216ENST00000523088 A8MT66 165 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 C17orf100A8MU93 164 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 SHISA9B4DS77 424 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 LILRA1O75019 489 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF737O75373 536 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 SNCGO76070 127 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 IFI6P09912 130 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 BCL2P10415 239 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 NMUP48645 174 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 RND3P61587 244 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF90Q03938 601 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 C2orf68Q2NKX9 166 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 Q499Y3 187 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 SLC25A47Q6Q0C1 308 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 C16orf47Q6ZP98 133 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-216ENST00000523088 C11orf53Q8IXP5 236 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF441Q8N8Z8 693 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 OR2T10Q8NGZ9 312 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 OTOSQ8NHW6 89 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 MRPL30Q8TCC3 161 aaKnown RBP6.12□□□□□ -1.43
HDAC3-216ENST00000523088 DEFB127Q9H1M4 99 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 BCL2L10Q9HD36 194 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 TECRQ9NZ01 308 aaKnown RBP6.12□□□□□ -1.43
HDAC3-216ENST00000523088 KLF12Q9Y4X4 402 aa6.12□□□□□ -1.43
HDAC3-216ENST00000523088 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 TEX50A0A1B0GTY4 177 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 A0A1W2PPK0 400 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 PINLYPA6NC86 204 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 SYS1-DBNDD2H3BUS1 97 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF708P17019 499 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 HOXD3P31249 432 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-216ENST00000523088 ATXN7L3Q14CW9 347 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-216ENST00000523088 ZNF678Q5SXM1 525 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 FAM27D1Q5T7N8 215 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 DMKNQ6E0U4 476 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-216ENST00000523088 LCN12Q6JVE5 192 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 RFLNBQ8N5W9 214 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 IMUPQ9GZP8 106 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 WNT10AQ9GZT5 417 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 REEP1Q9H902 201 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 SDF2L1Q9HCN8 221 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 MANBALQ9NQG1 85 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 TAAR3PQ9P1P4 343 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 CCDC168Q8NDH2 2452 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 CSMD1Q96PZ7 3565 aa6.11□□□□□ -1.43
HDAC3-216ENST00000523088 LY6LH3BQJ8 138 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 H3BUT2 72 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 J3QQQ9 107 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 CXCL13O43927 109 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 ARL6IP5O75915 188 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 EPPINO95925 133 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 MT-ND6P03923 174 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 CECR9P0C854 216 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 GLI4P10075 376 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 CRYGAP11844 174 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 VDAC1P21796 283 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 PSMB3P49720 205 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 LOXL3P58215 753 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 SRYQ05066 204 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 TFF3Q07654 80 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 FBXL19-AS1Q494R0 122 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 SPRNQ5BIV9 151 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 PRR31Q5SQ13 230 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 C10orf126Q8N4M7 172 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 TPRX1Q8N7U7 411 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 TEX45Q8NA69 505 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 PPDPFLQ8WWR9 84 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 CST11Q9H112 138 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 C21orf62Q9NYP8 219 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 FBXL7Q9UJT9 491 aa6.1□□□□□ -1.43
HDAC3-216ENST00000523088 FAM215AQ9Y5M1 114 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms