RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ERBINQ96RT1 1412 aa2.58□□□□□ -2
SKP1-209ENST00000522552 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
SKP1-209ENST00000522552 LOC100130705A0A1B0GUX0 176 aa2.58□□□□□ -2
SKP1-209ENST00000522552 GRIFINA4D1Z8 144 aa2.58□□□□□ -2
SKP1-209ENST00000522552 MEIS3P1A6NDR6 274 aa2.58□□□□□ -2
SKP1-209ENST00000522552 UBFD1O14562 309 aaKnown RBP2.58□□□□□ -2
SKP1-209ENST00000522552 SOD1P00441 154 aa2.58□□□□□ -2
SKP1-209ENST00000522552 NPYP01303 97 aa2.58□□□□□ -2
SKP1-209ENST00000522552 IGKV3-20P01619 116 aa2.58□□□□□ -2
SKP1-209ENST00000522552 HLA-EP13747 358 aa2.58□□□□□ -2
SKP1-209ENST00000522552 RPL35P42766 123 aaKnown RBP2.58□□□□□ -2
SKP1-209ENST00000522552 FAM229BQ4G0N7 80 aa2.58□□□□□ -2
SKP1-209ENST00000522552 LDLRAD2Q5SZI1 272 aa2.58□□□□□ -2
SKP1-209ENST00000522552 LYZL2Q7Z4W2 148 aa2.58□□□□□ -2
SKP1-209ENST00000522552 MMGT1Q8N4V1 131 aa2.58□□□□□ -2
SKP1-209ENST00000522552 TCTEX1D1Q8N7M0 179 aa2.58□□□□□ -2
SKP1-209ENST00000522552 MUC7Q8TAX7 377 aa2.58□□□□□ -2
SKP1-209ENST00000522552 YPEL2Q96QA6 119 aa2.58□□□□□ -2
SKP1-209ENST00000522552 SCGB3A1Q96QR1 104 aa2.58□□□□□ -2
SKP1-209ENST00000522552 NPCDR1Q9BY65 106 aa2.58□□□□□ -2
SKP1-209ENST00000522552 GFRA4Q9GZZ7 299 aa2.58□□□□□ -2
SKP1-209ENST00000522552 SMDT1Q9H4I9 107 aa2.58□□□□□ -2
SKP1-209ENST00000522552 ARHGEF11O15085 1522 aa2.58□□□□□ -2
SKP1-209ENST00000522552 MEGF6O75095 1541 aa2.58□□□□□ -2
SKP1-209ENST00000522552 ZNF670-ZNF695F2Z2N8 137 aa2.57□□□□□ -2
SKP1-209ENST00000522552 H3BQ85 93 aa2.57□□□□□ -2
SKP1-209ENST00000522552 VEGFCP49767 419 aa2.57□□□□□ -2
SKP1-209ENST00000522552 MIAQ16674 131 aa2.57□□□□□ -2
SKP1-209ENST00000522552 C2orf91Q6ZV80 131 aa2.57□□□□□ -2
SKP1-209ENST00000522552 LYG1Q8N1E2 194 aa2.57□□□□□ -2
SKP1-209ENST00000522552 NAT14Q8WUY8 206 aa2.57□□□□□ -2
SKP1-209ENST00000522552 ELSPBP1Q96BH3 223 aa2.57□□□□□ -2
SKP1-209ENST00000522552 EPDR1Q9UM22 224 aa2.57□□□□□ -2
SKP1-209ENST00000522552 CEP164Q9UPV0 1460 aa2.57□□□□□ -2
SKP1-209ENST00000522552 TP53BP1Q12888 1972 aaPredicted RBP2.57□□□□□ -2
SKP1-209ENST00000522552 MED1Q15648 1581 aaPredicted RBP2.57□□□□□ -2
SKP1-209ENST00000522552 VPS8Q8N3P4 1428 aa2.57□□□□□ -2
SKP1-209ENST00000522552 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
SKP1-209ENST00000522552 FAM236AA0A1B0GUQ0 79 aa2.57□□□□□ -2
SKP1-209ENST00000522552 FAM236BA0A1B0GV22 79 aa2.57□□□□□ -2
SKP1-209ENST00000522552 ZNF727A8MUV8 499 aa2.57□□□□□ -2
SKP1-209ENST00000522552 NCR2O95944 276 aa2.57□□□□□ -2
SKP1-209ENST00000522552 TCRAP04437 139 aa2.57□□□□□ -2
SKP1-209ENST00000522552 FGF7P21781 194 aa2.57□□□□□ -2
SKP1-209ENST00000522552 FOXA1P55317 472 aa2.57□□□□□ -2
SKP1-209ENST00000522552 FOXA3P55318 350 aaPredicted RBP2.57□□□□□ -2
SKP1-209ENST00000522552 DIAPH2-AS1Q14236 149 aa2.57□□□□□ -2
SKP1-209ENST00000522552 HES1Q14469 280 aa2.57□□□□□ -2
SKP1-209ENST00000522552 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
SKP1-209ENST00000522552 Q6ZQT7 251 aa2.57□□□□□ -2
SKP1-209ENST00000522552 SIGLECL1Q8N7X8 197 aa2.57□□□□□ -2
SKP1-209ENST00000522552 BPIFB6Q8NFQ5 453 aa2.57□□□□□ -2
SKP1-209ENST00000522552 OR5A2Q8NGI9 324 aa2.57□□□□□ -2
SKP1-209ENST00000522552 CST9LQ9H4G1 147 aa2.57□□□□□ -2
SKP1-209ENST00000522552 BANF2Q9H503 90 aa2.57□□□□□ -2
SKP1-209ENST00000522552 NIT2Q9NQR4 276 aa2.57□□□□□ -2
SKP1-209ENST00000522552 SCN3BQ9NY72 215 aa2.57□□□□□ -2
SKP1-209ENST00000522552 ZFC3H1O60293 1989 aaKnown RBP2.57□□□□□ -2
SKP1-209ENST00000522552 TOPBP1Q92547 1522 aa2.56□□□□□ -2
SKP1-209ENST00000522552 CITO14578 2027 aa2.56□□□□□ -2
SKP1-209ENST00000522552 ZNF646O15015 1829 aaPredicted RBP2.56□□□□□ -2
SKP1-209ENST00000522552 NYNRINQ9P2P1 1898 aaKnown RBP2.56□□□□□ -2
SKP1-209ENST00000522552 ARHGAP31Q2M1Z3 1444 aa2.56□□□□□ -2
SKP1-209ENST00000522552 SCN9AQ15858 1988 aa2.56□□□□□ -2
SKP1-209ENST00000522552 TRGV10A0A0A0MS01 117 aa2.56□□□□□ -2
SKP1-209ENST00000522552 IGHV3-15A0A0B4J1V0 119 aa2.56□□□□□ -2
SKP1-209ENST00000522552 A0A1W2PQD3 144 aa2.56□□□□□ -2
SKP1-209ENST00000522552 C17orf98A8MV24 154 aa2.56□□□□□ -2
SKP1-209ENST00000522552 C3orf84H3BNL1 204 aa2.56□□□□□ -2
SKP1-209ENST00000522552 NDUFB3O43676 98 aa2.56□□□□□ -2
SKP1-209ENST00000522552 HIST1H2BKO60814 126 aa2.56□□□□□ -2
SKP1-209ENST00000522552 IGLV7-43P04211 117 aa2.56□□□□□ -2
SKP1-209ENST00000522552 HIST1H2BJP06899 126 aa2.56□□□□□ -2
SKP1-209ENST00000522552 MUC1P15941 1255 aaPredicted RBP2.56□□□□□ -2
SKP1-209ENST00000522552 CRYGSP22914 178 aa2.56□□□□□ -2
SKP1-209ENST00000522552 AKR1D1P51857 326 aa2.56□□□□□ -2
SKP1-209ENST00000522552 GNG2P59768 71 aa2.56□□□□□ -2
SKP1-209ENST00000522552 FUT5Q11128 374 aa2.56□□□□□ -2
SKP1-209ENST00000522552 LPAL2Q16609 132 aa2.56□□□□□ -2
SKP1-209ENST00000522552 HSD17B12Q53GQ0 312 aa2.56□□□□□ -2
SKP1-209ENST00000522552 C2orf83Q53S99 150 aa2.56□□□□□ -2
SKP1-209ENST00000522552 ZNF660Q6AZW8 331 aaPredicted RBP2.56□□□□□ -2
SKP1-209ENST00000522552 EIF5AL1Q6IS14 154 aaKnown RBP2.56□□□□□ -2
SKP1-209ENST00000522552 RPRMLQ8N4K4 120 aa2.56□□□□□ -2
SKP1-209ENST00000522552 LINC00612Q8N6U2 182 aa2.56□□□□□ -2
SKP1-209ENST00000522552 C3orf56Q8N813 242 aa2.56□□□□□ -2
SKP1-209ENST00000522552 MAGOHBQ96A72 148 aaKnown RBP2.56□□□□□ -2
SKP1-209ENST00000522552 IMMP2LQ96T52 175 aa2.56□□□□□ -2
SKP1-209ENST00000522552 MIEN1Q9BRT3 115 aa2.56□□□□□ -2
SKP1-209ENST00000522552 ZNF443Q9Y2A4 671 aaPredicted RBP2.56□□□□□ -2
SKP1-209ENST00000522552 MYH6P13533 1939 aa2.56□□□□□ -2
SKP1-209ENST00000522552 MYH9P35579 1960 aaKnown RBP2.56□□□□□ -2
SKP1-209ENST00000522552 TRPM6Q9BX84 2022 aa2.55□□□□□ -2
SKP1-209ENST00000522552 GRIN2AQ12879 1464 aa2.55□□□□□ -2
SKP1-209ENST00000522552 LCTP09848 1927 aa2.55□□□□□ -2
SKP1-209ENST00000522552 PTPRSQ13332 1948 aa2.55□□□□□ -2
SKP1-209ENST00000522552 SPAARA0A1B0GVQ0 90 aa2.55□□□□□ -2
SKP1-209ENST00000522552 A8MWV9 139 aa2.55□□□□□ -2
SKP1-209ENST00000522552 H3BT86 120 aa2.55□□□□□ -2
SKP1-209ENST00000522552 XCL1P47992 114 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms