RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 CSN1S1P47710 185 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 TMEM97Q5BJF2 176 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 AP5S1Q9NUS5 200 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 SOX21Q9Y651 276 aaPredicted RBP11.6□□□□□ -0.55
TRIM41-204ENST00000508930 ROS1P08922 2347 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 A0A1B0GXF2 115 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 C9orf172C9J069 976 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 IGKV3-15P01624 115 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 SCRT2Q9NQ03 307 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 TCRBV4S1A1TA0A5B7 111 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 M0R1B8 84 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 SAP30O75446 220 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
TRIM41-204ENST00000508930 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
TRIM41-204ENST00000508930 RAB37Q96AX2 223 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
TRIM41-204ENST00000508930 TPRP12270 2363 aaKnown RBP11.59□□□□□ -0.55
TRIM41-204ENST00000508930 FAM231BA6NCW3 169 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 A6NDN8 102 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 CIDEAO60543 219 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 FAM120AOSQ5T036 256 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 ATP1A1-AS1Q5TC04 95 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 S100A7AQ86SG5 101 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 PRNTQ86SH4 94 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 MRPL20Q9BYC9 149 aaKnown RBP11.59□□□□□ -0.55
TRIM41-204ENST00000508930 SH3BGRL2Q9UJC5 107 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 HILPDAQ9Y5L2 63 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 H3BUT2 72 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 LAMTOR5O43504 91 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 PATE2Q6UY27 113 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
TRIM41-204ENST00000508930 H1FXQ92522 213 aaKnown RBP11.59□□□□□ -0.55
TRIM41-204ENST00000508930 INTS1Q8N201 2190 aaKnown RBP11.59□□□□□ -0.55
TRIM41-204ENST00000508930 APELAP0DMC3 54 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 C1RLQ9NZP8 487 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 SERTM2A0A1B0GWG4 89 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 TNRC18O15417 2968 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-204ENST00000508930 SPRNQ5BIV9 151 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 C1orf185Q5T7R7 199 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 HCP5Q6MZN7 132 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-204ENST00000508930 MDS2Q8NDY4 140 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 GTSF1Q8WW33 167 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 IGHV1-18A0A0C4DH31 117 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 CRXO43186 299 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-204ENST00000508930 ENSAO43768 121 aaKnown RBP11.58□□□□□ -0.56
TRIM41-204ENST00000508930 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
TRIM41-204ENST00000508930 LOC389332A0A1B0GUA5 103 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 RNF7Q9UBF6 113 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 TRAV8-1A0A0A6YYK1 113 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 SEC11AP67812 179 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 TEX45Q8NA69 505 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 OR10X1Q8NGY0 326 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 OSR1Q8TAX0 266 aaPredicted RBP11.57□□□□□ -0.56
TRIM41-204ENST00000508930 NCOR1P1Q9H4R4 102 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 RIGQ13278 110 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 PEAR1Q5VY43 1037 aaPredicted RBP11.57□□□□□ -0.56
TRIM41-204ENST00000508930 MBNL2Q5VZF2 373 aaKnown RBP11.57□□□□□ -0.56
TRIM41-204ENST00000508930 FER1L6-AS1Q8NA97 138 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 TMEM116Q8NCL8 245 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 SRSF12Q8WXF0 261 aaKnown RBP11.57□□□□□ -0.56
TRIM41-204ENST00000508930 Q9H3A6 140 aa11.57□□□□□ -0.56
TRIM41-204ENST00000508930 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 NAV3Q8IVL0 2385 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 COX8AP10176 69 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 CR1LQ2VPA4 569 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
TRIM41-204ENST00000508930 SARAFQ96BY9 339 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 FMC1Q96HJ9 113 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 DYSFO75923 2080 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 NBEAQ8NFP9 2946 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 IGLC1P0CG04 106 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 SP9P0CG40 484 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 PRB4P10163 310 aaPredicted RBP11.56□□□□□ -0.56
TRIM41-204ENST00000508930 GOLT1AQ6ZVE7 132 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 PROCRQ9UNN8 238 aa11.56□□□□□ -0.56
TRIM41-204ENST00000508930 BHLHA15Q7RTS1 189 aaPredicted RBP11.55□□□□□ -0.56
TRIM41-204ENST00000508930 VSTM2AQ8TAG5 236 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 NDFIP1Q9BT67 221 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 RPUSD1Q9UJJ7 312 aaKnown RBP11.55□□□□□ -0.56
TRIM41-204ENST00000508930 MUC3AQ02505 3323 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 PTPRBP23467 1997 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 TMEM238C9JI98 176 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 TCRAP04437 139 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 FAM87AP0C7U9 286 aa11.55□□□□□ -0.56
TRIM41-204ENST00000508930 KIR2DL2P43627 348 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms