RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ATG101Q9BSB4 218 aa13.59□□□□□ -0.23
LIN54-204ENST00000505397 RAB1BQ9H0U4 201 aa13.59□□□□□ -0.23
LIN54-204ENST00000505397 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
LIN54-204ENST00000505397 M0QZK8 103 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 PEX7O00628 323 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 CA1P00915 261 aaPredicted RBP13.58□□□□□ -0.24
LIN54-204ENST00000505397 SERTAD4Q9NUC0 356 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 CTSZQ9UBR2 303 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 CRYGCP07315 174 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 SRIP30626 198 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 VAMP8Q9BV40 100 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 C7orf69Q9H7B7 122 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 NRN1Q9NPD7 142 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 ACACBO00763 2458 aa13.58□□□□□ -0.24
LIN54-204ENST00000505397 ZNF253O75346 499 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 LYNX1G3V0Z9 82 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 APCSP02743 223 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 LYNX1P0DP58 116 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
LIN54-204ENST00000505397 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
LIN54-204ENST00000505397 GRAMD2BQ96HH9 432 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 PAM16Q9Y3D7 125 aa13.57□□□□□ -0.24
LIN54-204ENST00000505397 NUDT10Q8NFP7 164 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 NUDT11Q96G61 164 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 RITA1Q96K30 269 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 FAM103A1Q9BTL3 118 aaKnown RBP13.56□□□□□ -0.24
LIN54-204ENST00000505397 ZNF324O75467 553 aaPredicted RBP13.56□□□□□ -0.24
LIN54-204ENST00000505397 MC5RP33032 325 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 AMTP48728 403 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 SLAQ13239 276 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 LINC00305Q7Z4B0 112 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 SSBP3Q9BWW4 388 aaPredicted RBP13.56□□□□□ -0.24
LIN54-204ENST00000505397 ZNF331Q9NQX6 463 aaPredicted RBP13.56□□□□□ -0.24
LIN54-204ENST00000505397 TPSG1Q9NRR2 321 aa13.56□□□□□ -0.24
LIN54-204ENST00000505397 C22orf46C9J442 243 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 IGHV3-48P01763 117 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 CTRLP40313 264 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 VMA21Q3ZAQ7 101 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 TMEM155Q4W5P6 130 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 NIT1Q86X76 327 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 MRPL27Q9P0M9 148 aaKnown RBP13.55□□□□□ -0.24
LIN54-204ENST00000505397 SLC25A17O43808 307 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 RUSC1-AS1Q66K80 236 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 C11orf42Q8N5U0 333 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 NUP35Q8NFH5 326 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 OR4B1Q8NGF8 309 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 TSKUQ8WUA8 353 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 KLF12Q9Y4X4 402 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 TRAV34A0A0B4J273 112 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 IGLC7A0M8Q6 106 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 DIRC3C9JPN6 131 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 LGALS7P47929 136 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 KRTDAPP60985 99 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 ZNF841Q6ZN19 808 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 SMIM12Q96EX1 92 aa13.55□□□□□ -0.24
LIN54-204ENST00000505397 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
LIN54-204ENST00000505397 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
LIN54-204ENST00000505397 MFAP2P55001 183 aa13.54□□□□□ -0.24
LIN54-204ENST00000505397 ETFRF1Q6IPR1 90 aa13.54□□□□□ -0.24
LIN54-204ENST00000505397 EPDR1Q9UM22 224 aa13.54□□□□□ -0.24
LIN54-204ENST00000505397 IGHV1-8P0DP01 117 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 PRRX1P54821 245 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 PERPQ96FX8 193 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 TRGV9Q99603 122 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 TNFRSF19Q9NS68 423 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 CRYGBP07316 175 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 PMCHP20382 165 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 PAX2Q02962 417 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 KLF5Q13887 457 aaPredicted RBP13.53□□□□□ -0.24
LIN54-204ENST00000505397 ZNF124Q15973 351 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 TEX45Q8NA69 505 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 TIMD4Q96H15 378 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 TMEM68Q96MH6 324 aa13.53□□□□□ -0.24
LIN54-204ENST00000505397 RALYQ9UKM9 306 aaKnown RBP13.53□□□□□ -0.24
LIN54-204ENST00000505397 LRBAP50851 2863 aa13.52□□□□□ -0.24
LIN54-204ENST00000505397 C11orf71Q6IPW1 123 aa13.52□□□□□ -0.24
LIN54-204ENST00000505397 TMEM116Q8NCL8 245 aa13.52□□□□□ -0.24
LIN54-204ENST00000505397 NEU4Q8WWR8 484 aaPredicted RBP13.52□□□□□ -0.24
LIN54-204ENST00000505397 MLST8Q9BVC4 326 aa13.52□□□□□ -0.24
LIN54-204ENST00000505397 OR2J3O76001 311 aa13.52□□□□□ -0.25
LIN54-204ENST00000505397 C3orf79P0CE67 100 aa13.52□□□□□ -0.25
LIN54-204ENST00000505397 HIST1H1EP10412 219 aaKnown RBP13.52□□□□□ -0.25
LIN54-204ENST00000505397 GNG5P63218 68 aa13.52□□□□□ -0.25
LIN54-204ENST00000505397 C19orf35Q6ZS72 473 aa13.52□□□□□ -0.25
LIN54-204ENST00000505397 A0A1B0GXF2 115 aa13.51□□□□□ -0.25
LIN54-204ENST00000505397 VWC2LB2RUY7 222 aa13.51□□□□□ -0.25
LIN54-204ENST00000505397 MOSP00540 346 aa13.51□□□□□ -0.25
LIN54-204ENST00000505397 ATP5L2Q7Z4Y8 100 aa13.51□□□□□ -0.25
LIN54-204ENST00000505397 TMEM133Q9H2Q1 129 aa13.51□□□□□ -0.25
LIN54-204ENST00000505397 LY6HO94772 140 aa13.5□□□□□ -0.25
LIN54-204ENST00000505397 RPLP1P05386 114 aaKnown RBP13.5□□□□□ -0.25
LIN54-204ENST00000505397 PLP1P60201 277 aa13.5□□□□□ -0.25
LIN54-204ENST00000505397 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
LIN54-204ENST00000505397 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
LIN54-204ENST00000505397 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms