RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RD3LP0DJH9 198 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 BTCP35070 178 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
NELFE-213ENST00000494956 DEFB1P60022 68 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 DHRS2Q13268 280 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 OR2F1Q13607 317 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 LRTM2Q8N967 370 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 OR11H2Q8NH07 326 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 RARRES2Q99969 163 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 PBDC1Q9BVG4 233 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 RYR2Q92736 4967 aa7.76□□□□□ -1.17
NELFE-213ENST00000494956 IGKV1OR2-108A0A075B7D4 117 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 TRAV2A0A0B4J234 112 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 DUXBA0A1W2PPF3 345 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 C9orf170A2RU37 121 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 ZFP92A6NM28 416 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 H3BP45 60 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 BUB3O43684 328 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 NDUFB6O95139 128 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 CD5P06127 495 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 C4BPBP20851 252 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 UBE2MP61081 183 aaKnown RBP7.75□□□□□ -1.17
NELFE-213ENST00000494956 PSMG4Q5JS54 123 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 TRIQKQ629K1 86 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 NOXA1Q86UR1 476 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 STHQ8IWL8 128 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 RNF125Q96EQ8 232 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 NARS2Q96I59 477 aaKnown RBP7.75□□□□□ -1.17
NELFE-213ENST00000494956 CLEC5AQ9NY25 188 aa7.75□□□□□ -1.17
NELFE-213ENST00000494956 DYNC2H1Q8NCM8 4307 aaKnown RBP7.74□□□□□ -1.17
NELFE-213ENST00000494956 PRSS46E5RG02 174 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 SYNGR2O43760 224 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 JTBO76095 146 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 ANXA7P20073 488 aaKnown RBP7.74□□□□□ -1.17
NELFE-213ENST00000494956 INPP1P49441 399 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 NANOS2P60321 138 aaKnown RBP7.74□□□□□ -1.17
NELFE-213ENST00000494956 LYZP61626 148 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 SIGLEC15Q6ZMC9 328 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 TRPT1Q86TN4 253 aaKnown RBP7.74□□□□□ -1.17
NELFE-213ENST00000494956 GRAMD2BQ96HH9 432 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 SLC35E1Q96K37 410 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 RAB40CQ96S21 281 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 TMED3Q9Y3Q3 217 aa7.74□□□□□ -1.17
NELFE-213ENST00000494956 HELTA6NFD8 242 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 FAM90A26D6RGX4 464 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 CCNKO75909 580 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 SLC25A6P12236 298 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 IL7P13232 177 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 GATA2P23769 480 aaPredicted RBP7.73□□□□□ -1.17
NELFE-213ENST00000494956 GPX4P36969 197 aaPredicted RBP7.73□□□□□ -1.17
NELFE-213ENST00000494956 POLR2GP62487 172 aaKnown RBP eCLIP7.73□□□□□ -1.17
NELFE-213ENST00000494956 SPANXN5Q5MJ07 72 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 TMEM182Q6ZP80 229 aaPredicted RBP7.73□□□□□ -1.17
NELFE-213ENST00000494956 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 LYSTQ99698 3801 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 WDR12Q9GZL7 423 aaKnown RBP7.73□□□□□ -1.17
NELFE-213ENST00000494956 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
NELFE-213ENST00000494956 NAP1L6A6NFF2 107 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 PLA2G10O15496 165 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 MED6O75586 246 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 OR4E1P0C645 316 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 EIF2B2P49770 351 aaKnown RBP7.72□□□□□ -1.17
NELFE-213ENST00000494956 RAB11AP62491 216 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 GDF5OSQ5U4N7 250 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 CEMP1Q6PRD7 247 aaPredicted RBP7.72□□□□□ -1.17
NELFE-213ENST00000494956 PHLDA1Q8WV24 401 aaPredicted RBP7.72□□□□□ -1.17
NELFE-213ENST00000494956 DEDD2Q8WXF8 326 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 LINC00476Q8WZB0 136 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 NRN1Q9NPD7 142 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 FBXL17Q9UF56 701 aa7.72□□□□□ -1.17
NELFE-213ENST00000494956 NUPR2A6NF83 97 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 SSSCA1O60232 199 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 LY6G6CO95867 125 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 SCGB1D2O95969 90 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 IGKV3-20P01619 116 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 RBMY1A1P0DJD3 496 aaKnown RBP7.71□□□□□ -1.18
NELFE-213ENST00000494956 RBMY1CP0DJD4 496 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 FXYD7P58549 80 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 TNP2Q05952 138 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 RBMY1FQ15415 496 aaKnown RBP7.71□□□□□ -1.18
NELFE-213ENST00000494956 C4orf46Q504U0 113 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 ACOT7LQ6ZUV0 252 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 THAP8Q8NA92 274 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 OR4D5Q8NGN0 318 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 TRGV9Q99603 122 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 X6R8D5 127 aa7.71□□□□□ -1.18
NELFE-213ENST00000494956 SACSQ9NZJ4 4579 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 IGHV4-28A0A0C4DH34 117 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 PMS2P5A8MQ11 134 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 SNRPGP15A8MWD9 76 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 CCSO14618 274 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 AP2S1P53680 142 aaPredicted RBP7.7□□□□□ -1.18
NELFE-213ENST00000494956 PAX9P55771 341 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 ATP5IP56385 69 aaPredicted RBP7.7□□□□□ -1.18
NELFE-213ENST00000494956 ID3Q02535 119 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 OR8G2PQ6IF36 304 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 Q8NAQ8 132 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 CSNK1G2-AS1Q8NCQ2 148 aa7.7□□□□□ -1.18
NELFE-213ENST00000494956 C11orf45Q8TAV5 145 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms