RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 C7orf50Q9BRJ6 194 aaKnown RBP24.44■■□□□ 1.5
CBX4-203ENST00000494546 OR4E1P0C645 316 aa24.43■■□□□ 1.5
CBX4-203ENST00000494546 ANXA7P20073 488 aaKnown RBP24.43■■□□□ 1.5
CBX4-203ENST00000494546 RPP30P78346 268 aaKnown RBP24.43■■□□□ 1.5
CBX4-203ENST00000494546 DHRS2Q13268 280 aa24.43■■□□□ 1.5
CBX4-203ENST00000494546 LCE6AA0A183 80 aa24.42■■□□□ 1.5
CBX4-203ENST00000494546 ZNF90Q03938 601 aa24.42■■□□□ 1.5
CBX4-203ENST00000494546 DCANP1Q8TF63 244 aa24.42■■□□□ 1.5
CBX4-203ENST00000494546 RNF125Q96EQ8 232 aa24.42■■□□□ 1.5
CBX4-203ENST00000494546 PBDC1Q9BVG4 233 aa24.42■■□□□ 1.5
CBX4-203ENST00000494546 STARD9Q9P2P6 4700 aa24.41■■□□□ 1.5
CBX4-203ENST00000494546 IGKV1D-37A0A075B6S9 117 aa24.41■■□□□ 1.5
CBX4-203ENST00000494546 ZNF688P0C7X2 276 aa24.41■■□□□ 1.5
CBX4-203ENST00000494546 AP2S1P53680 142 aaPredicted RBP24.41■■□□□ 1.5
CBX4-203ENST00000494546 C4orf46Q504U0 113 aa24.41■■□□□ 1.5
CBX4-203ENST00000494546 CSMD3Q7Z407 3707 aa24.41■■□□□ 1.5
CBX4-203ENST00000494546 TENM2Q9NT68 2774 aa24.41■■□□□ 1.5
CBX4-203ENST00000494546 STHQ8IWL8 128 aa24.4■■□□□ 1.5
CBX4-203ENST00000494546 BUB3O43684 328 aa24.39■■□□□ 1.49
CBX4-203ENST00000494546 CA1P00915 261 aaPredicted RBP24.39■■□□□ 1.49
CBX4-203ENST00000494546 SPANXN5Q5MJ07 72 aa24.39■■□□□ 1.49
CBX4-203ENST00000494546 IFNA21P01568 189 aa24.38■■□□□ 1.49
CBX4-203ENST00000494546 FABP1P07148 127 aa24.38■■□□□ 1.49
CBX4-203ENST00000494546 H3BP45 60 aa24.37■■□□□ 1.49
CBX4-203ENST00000494546 EWSR1Q01844 656 aaKnown RBP eCLIP24.37■■□□□ 1.493e-6■■■■■ 36.6
CBX4-203ENST00000494546 OR2F1Q13607 317 aa24.37■■□□□ 1.49
CBX4-203ENST00000494546 KNCNA6PVL3 124 aa24.36■■□□□ 1.49
CBX4-203ENST00000494546 LYZP61626 148 aa24.36■■□□□ 1.49
CBX4-203ENST00000494546 SIGLEC15Q6ZMC9 328 aa24.36■■□□□ 1.49
CBX4-203ENST00000494546 GATAD1Q8WUU5 269 aa24.36■■□□□ 1.49
CBX4-203ENST00000494546 DYNC2H1Q8NCM8 4307 aaKnown RBP24.36■■□□□ 1.49
CBX4-203ENST00000494546 PLA2G10O15496 165 aa24.35■■□□□ 1.49
CBX4-203ENST00000494546 POLR2GP62487 172 aaKnown RBP eCLIP24.35■■□□□ 1.49
CBX4-203ENST00000494546 ID3Q02535 119 aa24.35■■□□□ 1.49
CBX4-203ENST00000494546 TRGV9Q99603 122 aa24.35■■□□□ 1.49
CBX4-203ENST00000494546 PFDN2Q9UHV9 154 aa24.35■■□□□ 1.49
CBX4-203ENST00000494546 STRAPQ9Y3F4 350 aaKnown RBP24.35■■□□□ 1.49
CBX4-203ENST00000494546 SNRPGP15A8MWD9 76 aa24.34■■□□□ 1.49
CBX4-203ENST00000494546 NKX2-1P43699 371 aaPredicted RBP24.34■■□□□ 1.49
CBX4-203ENST00000494546 PMS2P11Q13670 270 aa24.34■■□□□ 1.49
CBX4-203ENST00000494546 PSMG4Q5JS54 123 aa24.34■■□□□ 1.49
CBX4-203ENST00000494546 OR8G2PQ6IF36 304 aa24.34■■□□□ 1.49
CBX4-203ENST00000494546 RARRES2Q99969 163 aa24.34■■□□□ 1.49
CBX4-203ENST00000494546 IGKV1OR2-108A0A075B7D4 117 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 CXorf65A6NEN9 183 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 PRSS46E5RG02 174 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 LYRM1O43325 122 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 NUP62P37198 522 aaPredicted RBP24.33■■□□□ 1.49
CBX4-203ENST00000494546 CNPY1Q3B7I2 92 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 THAP8Q8NA92 274 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 C20orf85Q9H1P6 137 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 NRN1Q9NPD7 142 aa24.33■■□□□ 1.49
CBX4-203ENST00000494546 ACTL10Q5JWF8 245 aa24.32■■□□□ 1.48
CBX4-203ENST00000494546 TRPT1Q86TN4 253 aaKnown RBP24.32■■□□□ 1.48
CBX4-203ENST00000494546 OR4D5Q8NGN0 318 aa24.32■■□□□ 1.48
CBX4-203ENST00000494546 OR11H2Q8NH07 326 aa24.32■■□□□ 1.48
CBX4-203ENST00000494546 SSSCA1O60232 199 aa24.31■■□□□ 1.48
CBX4-203ENST00000494546 TMEM217Q8N7C4 229 aa24.31■■□□□ 1.48
CBX4-203ENST00000494546 PSENENQ9NZ42 101 aa24.31■■□□□ 1.48
CBX4-203ENST00000494546 SNRPD3P62318 126 aaKnown RBP24.3■■□□□ 1.48
CBX4-203ENST00000494546 PPP1R14BQ96C90 147 aa24.3■■□□□ 1.48
CBX4-203ENST00000494546 SCGB1D2O95969 90 aa24.29■■□□□ 1.48
CBX4-203ENST00000494546 AKR1C1Q04828 323 aa24.29■■□□□ 1.48
CBX4-203ENST00000494546 IAH1Q2TAA2 248 aaPredicted RBP24.29■■□□□ 1.48
CBX4-203ENST00000494546 MITD1Q8WV92 249 aa24.29■■□□□ 1.48
CBX4-203ENST00000494546 JTBO76095 146 aa24.28■■□□□ 1.48
CBX4-203ENST00000494546 ACOT7LQ6ZUV0 252 aa24.28■■□□□ 1.48
CBX4-203ENST00000494546 RAB40CQ96S21 281 aa24.28■■□□□ 1.48
CBX4-203ENST00000494546 CCDC32Q9BV29 185 aa24.27■■□□□ 1.48
CBX4-203ENST00000494546 GSKIPQ9P0R6 139 aa24.27■■□□□ 1.48
CBX4-203ENST00000494546 TRAV6A0A075B6T7 132 aa24.26■■□□□ 1.47
CBX4-203ENST00000494546 TCRBP04435 133 aa24.26■■□□□ 1.47
CBX4-203ENST00000494546 SPP1P10451 314 aa24.26■■□□□ 1.47
CBX4-203ENST00000494546 ATF4P18848 351 aaPredicted RBP24.26■■□□□ 1.47
CBX4-203ENST00000494546 MORN3Q6PF18 240 aaPredicted RBP24.26■■□□□ 1.47
CBX4-203ENST00000494546 SMIM8Q96KF7 97 aa24.26■■□□□ 1.47
CBX4-203ENST00000494546 SMCO3A2RU48 225 aa24.25■■□□□ 1.47
CBX4-203ENST00000494546 C1orf194Q5T5A4 169 aa24.25■■□□□ 1.47
CBX4-203ENST00000494546 SEPSECSQ9HD40 501 aaKnown RBP24.25■■□□□ 1.47
CBX4-203ENST00000494546 FBXL17Q9UF56 701 aa24.25■■□□□ 1.47
CBX4-203ENST00000494546 SACSQ9NZJ4 4579 aa24.24■■□□□ 1.47
CBX4-203ENST00000494546 AGRNO00468 2067 aa24.24■■□□□ 1.47
CBX4-203ENST00000494546 CFDP00746 253 aaPredicted RBP24.24■■□□□ 1.47
CBX4-203ENST00000494546 GIG44P09565 113 aaPredicted RBP24.24■■□□□ 1.47
CBX4-203ENST00000494546 ZBTB8BQ8NAP8 495 aaPredicted RBP24.24■■□□□ 1.47
CBX4-203ENST00000494546 C4BPBP20851 252 aa24.23■■□□□ 1.47
CBX4-203ENST00000494546 GATA2P23769 480 aaPredicted RBP24.23■■□□□ 1.47
CBX4-203ENST00000494546 OR8I2Q8N0Y5 310 aa24.23■■□□□ 1.47
CBX4-203ENST00000494546 BPIFCQ8NFQ6 507 aa24.23■■□□□ 1.47
CBX4-203ENST00000494546 NUDT15Q9NV35 164 aa24.23■■□□□ 1.47
CBX4-203ENST00000494546 NUPR2A6NF83 97 aa24.22■■□□□ 1.47
CBX4-203ENST00000494546 PAX9P55771 341 aa24.22■■□□□ 1.47
CBX4-203ENST00000494546 TMEM41BQ5BJD5 291 aa24.22■■□□□ 1.47
CBX4-203ENST00000494546 TMEM182Q6ZP80 229 aaPredicted RBP24.22■■□□□ 1.47
CBX4-203ENST00000494546 WDR12Q9GZL7 423 aaKnown RBP24.22■■□□□ 1.47
CBX4-203ENST00000494546 CCSO14618 274 aa24.21■■□□□ 1.47
CBX4-203ENST00000494546 CCNKO75909 580 aa24.21■■□□□ 1.47
CBX4-203ENST00000494546 ORM2P19652 201 aa24.21■■□□□ 1.47
CBX4-203ENST00000494546 TMEM144Q7Z5S9 345 aa24.21■■□□□ 1.47
CBX4-203ENST00000494546 RYR2Q92736 4967 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms