RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 A0A1W2PS18 150 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 WRBO00258 174 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 DEFB4AO15263 64 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 CCNKO75909 580 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 CD5P06127 495 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 IL7P13232 177 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 C4BPBP20851 252 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 GPX4P36969 197 aaPredicted RBP9.19□□□□□ -0.94
HSPG2-212ENST00000493940 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
HSPG2-212ENST00000493940 ID3Q02535 119 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 DHRS2Q13268 280 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 ETFRF1Q6IPR1 90 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 TRPT1Q86TN4 253 aaKnown RBP9.19□□□□□ -0.94
HSPG2-212ENST00000493940 DEDD2Q8WXF8 326 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 C17orf77Q96MU5 243 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 TMED3Q9Y3Q3 217 aa9.19□□□□□ -0.94
HSPG2-212ENST00000493940 H3BP45 60 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 SYNGR2O43760 224 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 JTBO76095 146 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 CA1P00915 261 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-212ENST00000493940 OR4E1P0C645 316 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 GATA2P23769 480 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-212ENST00000493940 PAX9P55771 341 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 UBE2MP61081 183 aaKnown RBP9.18□□□□□ -0.94
HSPG2-212ENST00000493940 OR2F1Q13607 317 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 NOXA1Q86UR1 476 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 OR11H2Q8NH07 326 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 RNF125Q96EQ8 232 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 GRAMD2BQ96HH9 432 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 RAB40CQ96S21 281 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 RARRES2Q99969 163 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 WDR12Q9GZL7 423 aaKnown RBP9.18□□□□□ -0.94
HSPG2-212ENST00000493940 TMEM231Q9H6L2 316 aa9.18□□□□□ -0.94
HSPG2-212ENST00000493940 DNAH10Q8IVF4 4471 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 PMS2P5A8MQ11 134 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 FAM90A26D6RGX4 464 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 POLR2GP62487 172 aaKnown RBP eCLIP9.17□□□□□ -0.94
HSPG2-212ENST00000493940 ACTL10Q5JWF8 245 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 THAP8Q8NA92 274 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 CSNK1G2-AS1Q8NCQ2 148 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 OR4D5Q8NGN0 318 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 PBDC1Q9BVG4 233 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 CACFD1Q9UGQ2 172 aa9.17□□□□□ -0.94
HSPG2-212ENST00000493940 PAIP2BQ9ULR5 123 aaKnown RBP9.17□□□□□ -0.94
HSPG2-212ENST00000493940 NAP1L6A6NFF2 107 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 ZFP92A6NM28 416 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 RBMY1A1P0DJD3 496 aaKnown RBP9.16□□□□□ -0.94
HSPG2-212ENST00000493940 RBMY1CP0DJD4 496 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 NANOS2P60321 138 aaKnown RBP9.16□□□□□ -0.94
HSPG2-212ENST00000493940 RBMY1FQ15415 496 aaKnown RBP9.16□□□□□ -0.94
HSPG2-212ENST00000493940 PSMG4Q5JS54 123 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 SPANXN5Q5MJ07 72 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 STHQ8IWL8 128 aa9.16□□□□□ -0.94
HSPG2-212ENST00000493940 DNAH6Q9C0G6 4158 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 CXorf65A6NEN9 183 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 SOCS3O14543 225 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 EIF2B2P49770 351 aaKnown RBP9.15□□□□□ -0.94
HSPG2-212ENST00000493940 ATP5IP56385 69 aaPredicted RBP9.15□□□□□ -0.94
HSPG2-212ENST00000493940 LYZP61626 148 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.94
HSPG2-212ENST00000493940 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 Q8NAQ8 132 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 GATAD1Q8WUU5 269 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 TRGV9Q99603 122 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 X6R8D5 127 aa9.15□□□□□ -0.94
HSPG2-212ENST00000493940 HELTA6NFD8 242 aa9.14□□□□□ -0.95
HSPG2-212ENST00000493940 SCGB2A1O75556 95 aa9.14□□□□□ -0.95
HSPG2-212ENST00000493940 MED6O75586 246 aa9.14□□□□□ -0.95
HSPG2-212ENST00000493940 INPP1P49441 399 aa9.14□□□□□ -0.95
HSPG2-212ENST00000493940 RAB11AP62491 216 aa9.14□□□□□ -0.95
HSPG2-212ENST00000493940 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
HSPG2-212ENST00000493940 NRN1Q9NPD7 142 aa9.14□□□□□ -0.95
HSPG2-212ENST00000493940 H3BMM0 161 aa9.13□□□□□ -0.95
HSPG2-212ENST00000493940 CCSO14618 274 aa9.13□□□□□ -0.95
HSPG2-212ENST00000493940 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
HSPG2-212ENST00000493940 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
HSPG2-212ENST00000493940 ACOT7LQ6ZUV0 252 aa9.13□□□□□ -0.95
HSPG2-212ENST00000493940 PHLDA1Q8WV24 401 aaPredicted RBP9.13□□□□□ -0.95
HSPG2-212ENST00000493940 C20orf173Q96LM9 149 aa9.13□□□□□ -0.95
HSPG2-212ENST00000493940 PSENENQ9NZ42 101 aa9.13□□□□□ -0.95
HSPG2-212ENST00000493940 ELOA3CA0A087WX78 387 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 IGHV4-28A0A0C4DH34 117 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 ZNF705EA8MWA4 302 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 SNRPGP15A8MWD9 76 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 F6UB75 175 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 LYRM1O43325 122 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 TCRBP04435 133 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 AP2S1P53680 142 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 FXYD7P58549 80 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 C4orf46Q504U0 113 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 OR8G2PQ6IF36 304 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 ZBTB8BQ8NAP8 495 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 MITD1Q8WV92 249 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms