RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 LYSTQ99698 3801 aa10.58□□□□□ -0.72
CLDN11-207ENST00000486975 FAM90A26D6RGX4 464 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 AP2S1P53680 142 aaPredicted RBP10.57□□□□□ -0.72
CLDN11-207ENST00000486975 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLDN11-207ENST00000486975 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
CLDN11-207ENST00000486975 USF2Q15853 346 aaPredicted RBP10.57□□□□□ -0.72
CLDN11-207ENST00000486975 SPANXN2Q5MJ10 180 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 FAM24BQ8N5W8 94 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 STXBP6Q8NFX7 210 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 OR1S1Q8NH92 325 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 ACY3Q96HD9 319 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
CLDN11-207ENST00000486975 NUPR2A6NF83 97 aa10.56□□□□□ -0.72
CLDN11-207ENST00000486975 IL4P05112 153 aa10.56□□□□□ -0.72
CLDN11-207ENST00000486975 RD3LP0DJH9 198 aa10.56□□□□□ -0.72
CLDN11-207ENST00000486975 VAMP1P23763 118 aa10.56□□□□□ -0.72
CLDN11-207ENST00000486975 GPX4P36969 197 aaPredicted RBP10.56□□□□□ -0.72
CLDN11-207ENST00000486975 UBE2MP61081 183 aaKnown RBP10.56□□□□□ -0.72
CLDN11-207ENST00000486975 SRRQ9GZT4 340 aa10.56□□□□□ -0.72
CLDN11-207ENST00000486975 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 BUB3O43684 328 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 SFT2D2O95562 160 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 IFNA4P05014 189 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 PSG1P11464 419 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 NUP62P37198 522 aaPredicted RBP10.55□□□□□ -0.72
CLDN11-207ENST00000486975 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 LEMD1Q68G75 181 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
CLDN11-207ENST00000486975 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 RARRES2Q99969 163 aa10.55□□□□□ -0.72
CLDN11-207ENST00000486975 C11orf68Q9H3H3 251 aaKnown RBP10.55□□□□□ -0.72
CLDN11-207ENST00000486975 SEPSECSQ9HD40 501 aaKnown RBP10.55□□□□□ -0.72
CLDN11-207ENST00000486975 NAP1L6A6NFF2 107 aa10.54□□□□□ -0.72
CLDN11-207ENST00000486975 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
CLDN11-207ENST00000486975 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
CLDN11-207ENST00000486975 OR8G2PQ6IF36 304 aa10.54□□□□□ -0.72
CLDN11-207ENST00000486975 CEMP1Q6PRD7 247 aaPredicted RBP10.54□□□□□ -0.72
CLDN11-207ENST00000486975 STHQ8IWL8 128 aa10.54□□□□□ -0.72
CLDN11-207ENST00000486975 OR51G1Q8NGK1 321 aa10.54□□□□□ -0.72
CLDN11-207ENST00000486975 SLC35E1Q96K37 410 aa10.54□□□□□ -0.72
CLDN11-207ENST00000486975 CIB3Q96Q77 187 aaPredicted RBP10.54□□□□□ -0.72
CLDN11-207ENST00000486975 MED6O75586 246 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 FABP1P07148 127 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 SPP1P10451 314 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 RAB11AP62491 216 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 DHRS2Q13268 280 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 PMS2P11Q13670 270 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 GAMTQ14353 236 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 MORN3Q6PF18 240 aaPredicted RBP10.53□□□□□ -0.72
CLDN11-207ENST00000486975 OR11H2Q8NH07 326 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 RNF125Q96EQ8 232 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 NRN1Q9NPD7 142 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 PFDN2Q9UHV9 154 aa10.53□□□□□ -0.72
CLDN11-207ENST00000486975 IGKV1D-37A0A075B6S9 117 aa10.52□□□□□ -0.73
CLDN11-207ENST00000486975 ZFP92A6NM28 416 aa10.52□□□□□ -0.73
CLDN11-207ENST00000486975 NDUFB6O95139 128 aa10.52□□□□□ -0.73
CLDN11-207ENST00000486975 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
CLDN11-207ENST00000486975 TRIQKQ629K1 86 aa10.52□□□□□ -0.73
CLDN11-207ENST00000486975 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 SYNGR2O43760 224 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
CLDN11-207ENST00000486975 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
CLDN11-207ENST00000486975 BAK1Q16611 211 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 GGNBP1Q5YKI7 109 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 THAP8Q8NA92 274 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 TRGV9Q99603 122 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
CLDN11-207ENST00000486975 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
CLDN11-207ENST00000486975 C9orf170A2RU37 121 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 HOXB5P09067 269 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 IAPPP10997 89 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 INPP1P49441 399 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 ZNF90Q03938 601 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 C1orf194Q5T5A4 169 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 LCE3BQ5TA77 95 aa10.5□□□□□ -0.73
CLDN11-207ENST00000486975 C7orf50Q9BRJ6 194 aaKnown RBP10.5□□□□□ -0.73
CLDN11-207ENST00000486975 PLECQ15149 4684 aaKnown RBP10.49□□□□□ -0.73
CLDN11-207ENST00000486975 KNCNA6PVL3 124 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 SNRPGP15A8MWD9 76 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 CFDP00746 253 aaPredicted RBP10.49□□□□□ -0.73
CLDN11-207ENST00000486975 C4BPBP20851 252 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 ID3Q02535 119 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 Q8NAQ8 132 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
CLDN11-207ENST00000486975 RAB40CQ96S21 281 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 SDHCQ99643 169 aaPredicted RBP10.49□□□□□ -0.73
CLDN11-207ENST00000486975 PBDC1Q9BVG4 233 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 FBXL17Q9UF56 701 aa10.49□□□□□ -0.73
CLDN11-207ENST00000486975 IGKV1OR2-108A0A075B7D4 117 aa10.48□□□□□ -0.73
CLDN11-207ENST00000486975 ZNF705EA8MWA4 302 aaPredicted RBP10.48□□□□□ -0.73
CLDN11-207ENST00000486975 CNPY1Q3B7I2 92 aa10.48□□□□□ -0.73
CLDN11-207ENST00000486975 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms