RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 TCTAP57738 103 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 SNRPD3P62318 126 aaKnown RBP18.64■□□□□ 0.57
HLA-F-227ENST00000485513 SOSTQ9BQB4 213 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 NRN1Q9NPD7 142 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 CLEC5AQ9NY25 188 aa18.64■□□□□ 0.57
HLA-F-227ENST00000485513 FRAS1Q86XX4 4008 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 C11orf94C9JXX5 98 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 SRPXP78539 464 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 SIGLEC15Q6ZMC9 328 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 OR51G1Q8NGK1 321 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 TBC1D24Q9ULP9 559 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 X6R8D5 127 aa18.63■□□□□ 0.57
HLA-F-227ENST00000485513 KLF9Q13886 244 aaPredicted RBP18.62■□□□□ 0.57
HLA-F-227ENST00000485513 CSNK1G2-AS1Q8NCQ2 148 aa18.62■□□□□ 0.57
HLA-F-227ENST00000485513 SEPSECSQ9HD40 501 aaKnown RBP18.62■□□□□ 0.57
HLA-F-227ENST00000485513 IGLL5B9A064 214 aa18.61■□□□□ 0.57
HLA-F-227ENST00000485513 H3BMQ9 156 aa18.61■□□□□ 0.57
HLA-F-227ENST00000485513 ATP5IP56385 69 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-227ENST00000485513 OR1S1Q8NH92 325 aa18.61■□□□□ 0.57
HLA-F-227ENST00000485513 MCFD2Q8NI22 146 aa18.61■□□□□ 0.57
HLA-F-227ENST00000485513 RNF125Q96EQ8 232 aa18.61■□□□□ 0.57
HLA-F-227ENST00000485513 HLA-DMBP28068 263 aa18.6■□□□□ 0.57
HLA-F-227ENST00000485513 NUP62P37198 522 aaPredicted RBP18.6■□□□□ 0.57
HLA-F-227ENST00000485513 PBDC1Q9BVG4 233 aa18.6■□□□□ 0.57
HLA-F-227ENST00000485513 ELOA3CA0A087WX78 387 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-227ENST00000485513 PIGBOS1A0A0B4J2F0 54 aa18.59■□□□□ 0.57
HLA-F-227ENST00000485513 ZFP92A6NM28 416 aa18.59■□□□□ 0.57
HLA-F-227ENST00000485513 FAUP35544 74 aaKnown RBP18.59■□□□□ 0.57
HLA-F-227ENST00000485513 GPX4P36969 197 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-227ENST00000485513 NUTF2P61970 127 aaKnown RBP18.59■□□□□ 0.57
HLA-F-227ENST00000485513 CENPSQ8N2Z9 138 aa18.59■□□□□ 0.57
HLA-F-227ENST00000485513 SLC35E1Q96K37 410 aa18.59■□□□□ 0.57
HLA-F-227ENST00000485513 C1QTNF4Q9BXJ3 329 aa18.59■□□□□ 0.57
HLA-F-227ENST00000485513 PFDN2Q9UHV9 154 aa18.59■□□□□ 0.57
HLA-F-227ENST00000485513 GAMTQ14353 236 aa18.58■□□□□ 0.56
HLA-F-227ENST00000485513 OR8G2PQ6IF36 304 aa18.58■□□□□ 0.56
HLA-F-227ENST00000485513 TMED4Q7Z7H5 227 aa18.58■□□□□ 0.56
HLA-F-227ENST00000485513 APLNQ9ULZ1 77 aa18.58■□□□□ 0.56
HLA-F-227ENST00000485513 H3BMM0 161 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 PRR20EP86478 221 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 PRR20CP86479 221 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 PRR20DP86480 221 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 PRR20BP86481 221 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 PRR20AP86496 221 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 Q6ZTC4 211 aa18.57■□□□□ 0.56
HLA-F-227ENST00000485513 IGKV1D-37A0A075B6S9 117 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 TRAV10A0A0B4J240 114 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 DUXBA0A1W2PPF3 345 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 AP3S2P59780 193 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 ZNF90Q03938 601 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 TRIM63Q969Q1 353 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 XCL2Q9UBD3 114 aa18.56■□□□□ 0.56
HLA-F-227ENST00000485513 PITX3O75364 302 aa18.55■□□□□ 0.56
HLA-F-227ENST00000485513 FABP1P07148 127 aa18.55■□□□□ 0.56
HLA-F-227ENST00000485513 HLA-DRB4P13762 266 aa18.55■□□□□ 0.56
HLA-F-227ENST00000485513 NKX2-1P43699 371 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-227ENST00000485513 PYDC2Q56P42 97 aa18.55■□□□□ 0.56
HLA-F-227ENST00000485513 TMEM128Q5BJH2 165 aa18.55■□□□□ 0.56
HLA-F-227ENST00000485513 HLA-DRB4X5D2U9 266 aa18.55■□□□□ 0.56
HLA-F-227ENST00000485513 VPS13DQ5THJ4 4388 aa18.54■□□□□ 0.56
HLA-F-227ENST00000485513 TOMM5Q8N4H5 51 aa18.54■□□□□ 0.56
HLA-F-227ENST00000485513 IAPPP10997 89 aa18.53■□□□□ 0.56
HLA-F-227ENST00000485513 VAMP1P23763 118 aa18.53■□□□□ 0.56
HLA-F-227ENST00000485513 LYZP61626 148 aa18.53■□□□□ 0.56
HLA-F-227ENST00000485513 RAB11AP62491 216 aa18.53■□□□□ 0.56
HLA-F-227ENST00000485513 CELA1Q9UNI1 258 aa18.53■□□□□ 0.56
HLA-F-227ENST00000485513 SNRPGP15A8MWD9 76 aa18.52■□□□□ 0.56
HLA-F-227ENST00000485513 C1orf194Q5T5A4 169 aa18.52■□□□□ 0.56
HLA-F-227ENST00000485513 LRTM2Q8N967 370 aa18.52■□□□□ 0.56
HLA-F-227ENST00000485513 WDR12Q9GZL7 423 aaKnown RBP18.52■□□□□ 0.56
HLA-F-227ENST00000485513 PAIP2BQ9ULR5 123 aaKnown RBP18.52■□□□□ 0.56
HLA-F-227ENST00000485513 DNAH10Q8IVF4 4471 aa18.52■□□□□ 0.56
HLA-F-227ENST00000485513 IGHV4-4A0A075B6R2 117 aa18.51■□□□□ 0.55
HLA-F-227ENST00000485513 SLC25A6P12236 298 aa18.51■□□□□ 0.55
HLA-F-227ENST00000485513 ID1P41134 155 aa18.51■□□□□ 0.55
HLA-F-227ENST00000485513 OR2F1Q13607 317 aa18.51■□□□□ 0.55
HLA-F-227ENST00000485513 LINC00052Q96N35 136 aa18.51■□□□□ 0.55
HLA-F-227ENST00000485513 TRGV9Q99603 122 aa18.51■□□□□ 0.55
HLA-F-227ENST00000485513 SLC25A21Q9BQT8 299 aaPredicted RBP18.51■□□□□ 0.55
HLA-F-227ENST00000485513 MED6O75586 246 aa18.5■□□□□ 0.55
HLA-F-227ENST00000485513 C12orf74Q32Q52 190 aa18.5■□□□□ 0.55
HLA-F-227ENST00000485513 GDF5OSQ5U4N7 250 aa18.5■□□□□ 0.55
HLA-F-227ENST00000485513 PPP1R14BQ96C90 147 aa18.5■□□□□ 0.55
HLA-F-227ENST00000485513 V9GYH0 126 aa18.5■□□□□ 0.55
HLA-F-227ENST00000485513 IGKV3-20P01619 116 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 PSMB3P49720 205 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 DEFB1P60022 68 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 ZNF767PQ75MW2 155 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 COQ8AQ8NI60 647 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 RNF126Q9BV68 326 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 SAV1Q9H4B6 383 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-227ENST00000485513 TMED3Q9Y3Q3 217 aa18.49■□□□□ 0.55
HLA-F-227ENST00000485513 ZNF79Q15937 498 aa18.48■□□□□ 0.55
HLA-F-227ENST00000485513 FOXI2Q6ZQN5 318 aa18.48■□□□□ 0.55
HLA-F-227ENST00000485513 OR8I2Q8N0Y5 310 aa18.48■□□□□ 0.55
HLA-F-227ENST00000485513 THAP8Q8NA92 274 aa18.48■□□□□ 0.55
HLA-F-227ENST00000485513 DEDD2Q8WXF8 326 aa18.48■□□□□ 0.55
HLA-F-227ENST00000485513 CIB3Q96Q77 187 aaPredicted RBP18.48■□□□□ 0.55
HLA-F-227ENST00000485513 IGKV1OR2-108A0A075B7D4 117 aa18.47■□□□□ 0.55
HLA-F-227ENST00000485513 DEFB131BA0A096LNP1 70 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms