RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 BUB3O43684 328 aa13.46□□□□□ -0.25
CLK1-211ENST00000481641 GSG1LQ6UXU4 331 aa13.46□□□□□ -0.25
CLK1-211ENST00000481641 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
CLK1-211ENST00000481641 CACFD1Q9UGQ2 172 aa13.46□□□□□ -0.25
CLK1-211ENST00000481641 X6R8D5 127 aa13.46□□□□□ -0.25
CLK1-211ENST00000481641 ANXA3P12429 323 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
CLK1-211ENST00000481641 ZNF90Q03938 601 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 GAMTQ14353 236 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 PYDC2Q56P42 97 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 LGALS9CQ6DKI2 356 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 SIGLEC15Q6ZMC9 328 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 PBDC1Q9BVG4 233 aa13.45□□□□□ -0.26
CLK1-211ENST00000481641 IGKV1D-37A0A075B6S9 117 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
CLK1-211ENST00000481641 ZNF705EA8MWA4 302 aaPredicted RBP13.44□□□□□ -0.26
CLK1-211ENST00000481641 IAPPP10997 89 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 DEFB1P60022 68 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 RNF125Q96EQ8 232 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
CLK1-211ENST00000481641 ZFP92A6NM28 416 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 PITX3O75364 302 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 MIFP14174 115 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 SRPXP78539 464 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 PRR20EP86478 221 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 PRR20CP86479 221 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 PRR20DP86480 221 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 PRR20BP86481 221 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 PRR20AP86496 221 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 TBC1D24Q9ULP9 559 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 V9GYH0 126 aa13.43□□□□□ -0.26
CLK1-211ENST00000481641 IGLL5B9A064 214 aa13.42□□□□□ -0.26
CLK1-211ENST00000481641 HLA-DMBP28068 263 aa13.42□□□□□ -0.26
CLK1-211ENST00000481641 FAUP35544 74 aaKnown RBP13.42□□□□□ -0.26
CLK1-211ENST00000481641 SNRPD3P62318 126 aaKnown RBP13.42□□□□□ -0.26
CLK1-211ENST00000481641 OR2F1Q13607 317 aa13.42□□□□□ -0.26
CLK1-211ENST00000481641 SLC35E1Q96K37 410 aa13.42□□□□□ -0.26
CLK1-211ENST00000481641 XCL2Q9UBD3 114 aa13.42□□□□□ -0.26
CLK1-211ENST00000481641 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
CLK1-211ENST00000481641 H3BMM0 161 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 VAMP1P23763 118 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
CLK1-211ENST00000481641 LYZP61626 148 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 ZNF79Q15937 498 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 TMEM128Q5BJH2 165 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 Q6ZTC4 211 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 WDR12Q9GZL7 423 aaKnown RBP13.41□□□□□ -0.26
CLK1-211ENST00000481641 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
CLK1-211ENST00000481641 AP3S2P59780 193 aa13.4□□□□□ -0.26
CLK1-211ENST00000481641 GDF5OSQ5U4N7 250 aa13.4□□□□□ -0.26
CLK1-211ENST00000481641 ZNF767PQ75MW2 155 aa13.4□□□□□ -0.26
CLK1-211ENST00000481641 MAGT1Q9H0U3 335 aa13.4□□□□□ -0.26
CLK1-211ENST00000481641 HRH4Q9H3N8 390 aa13.4□□□□□ -0.26
CLK1-211ENST00000481641 CELA1Q9UNI1 258 aa13.4□□□□□ -0.26
CLK1-211ENST00000481641 DUXBA0A1W2PPF3 345 aa13.39□□□□□ -0.27
CLK1-211ENST00000481641 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
CLK1-211ENST00000481641 IGKV3-20P01619 116 aa13.39□□□□□ -0.27
CLK1-211ENST00000481641 ATP5IP56385 69 aaPredicted RBP13.39□□□□□ -0.27
CLK1-211ENST00000481641 FXYD7P58549 80 aa13.39□□□□□ -0.27
CLK1-211ENST00000481641 PPP1R1AQ13522 171 aa13.39□□□□□ -0.27
CLK1-211ENST00000481641 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
CLK1-211ENST00000481641 SEPSECSQ9HD40 501 aaKnown RBP13.39□□□□□ -0.27
CLK1-211ENST00000481641 DNAH6Q9C0G6 4158 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 IGKV1OR2-108A0A075B7D4 117 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 C11orf94C9JXX5 98 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 SFT2D2O95562 160 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 HOXB5P09067 269 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 HLA-DRB4P13762 266 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 RAB11AP62491 216 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 OR8G2PQ6IF36 304 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 LRTM2Q8N967 370 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 HLA-DRB4X5D2U9 266 aa13.38□□□□□ -0.27
CLK1-211ENST00000481641 WRBO00258 174 aa13.37□□□□□ -0.27
CLK1-211ENST00000481641 NKX2-1P43699 371 aaPredicted RBP13.37□□□□□ -0.27
CLK1-211ENST00000481641 CCDC190Q86UF4 302 aa13.37□□□□□ -0.27
CLK1-211ENST00000481641 TRGV9Q99603 122 aa13.37□□□□□ -0.27
CLK1-211ENST00000481641 SLC25A21Q9BQT8 299 aaPredicted RBP13.37□□□□□ -0.27
CLK1-211ENST00000481641 TRAV10A0A0B4J240 114 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 SNRPGP15A8MWD9 76 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 SLC25A6P12236 298 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 S100A5P33763 92 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 NUP62P37198 522 aaPredicted RBP13.36□□□□□ -0.27
CLK1-211ENST00000481641 NUTF2P61970 127 aaKnown RBP13.36□□□□□ -0.27
CLK1-211ENST00000481641 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 GGNBP1Q5YKI7 109 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 PPP1R14BQ96C90 147 aa13.36□□□□□ -0.27
CLK1-211ENST00000481641 SOCS3O14543 225 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 SYNGR2O43760 224 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 MED6O75586 246 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 TCTAP57738 103 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 CENPSQ8N2Z9 138 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 THAP8Q8NA92 274 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 SCRT1Q9BWW7 348 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 C1QTNF4Q9BXJ3 329 aa13.35□□□□□ -0.27
CLK1-211ENST00000481641 PFDN2Q9UHV9 154 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms