RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 IL22RA2Q969J5 263 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
SMPD4-217ENST00000473720 RSL24D1Q9UHA3 163 aaKnown RBP8.67□□□□□ -1.02
SMPD4-217ENST00000473720 TBC1D24Q9ULP9 559 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 RABL2BQ9UNT1 228 aa8.67□□□□□ -1.02
SMPD4-217ENST00000473720 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-217ENST00000473720 A0A0B4J2A0 478 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 IAPPP10997 89 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 HLA-DMBP28068 263 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 DEFB1P60022 68 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 LYZP61626 148 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 SUPT4H1P63272 117 aaKnown RBP8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PRR20EP86478 221 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PRR20CP86479 221 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PRR20DP86480 221 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PRR20BP86481 221 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PRR20AP86496 221 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 KLF9Q13886 244 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PYDC2Q56P42 97 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 Q6ZTC4 211 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 PPP1R14BQ96C90 147 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 RNF125Q96EQ8 232 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 SLC35E1Q96K37 410 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 SLIRPQ9GZT3 109 aaKnown RBP8.66□□□□□ -1.02
SMPD4-217ENST00000473720 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 HSPB7Q9UBY9 170 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 U3KQ87 197 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 X6R8D5 127 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 BIRC6Q9NR09 4857 aa8.66□□□□□ -1.02
SMPD4-217ENST00000473720 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 C11orf94C9JXX5 98 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 H3BMQ9 156 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 BUB3O43684 328 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 VAMP1P23763 118 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 FAUP35544 74 aaKnown RBP8.65□□□□□ -1.02
SMPD4-217ENST00000473720 NUTF2P61970 127 aaKnown RBP8.65□□□□□ -1.02
SMPD4-217ENST00000473720 ZNF90Q03938 601 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 OR2F1Q13607 317 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 LINC00052Q96N35 136 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 CELA1Q9UNI1 258 aa8.65□□□□□ -1.02
SMPD4-217ENST00000473720 FRAS1Q86XX4 4008 aa8.65□□□□□ -1.03
SMPD4-217ENST00000473720 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 CCDC160A6NGH7 325 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-217ENST00000473720 GAMTQ14353 236 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 GDF5OSQ5U4N7 250 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 TOMM5Q8N4H5 51 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 BCL7BQ9BQE9 202 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
SMPD4-217ENST00000473720 IGHV4-4A0A075B6R2 117 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 IGKV1D-37A0A075B6S9 117 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 H3BMM0 161 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 EMP1P54849 157 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 RAB11AP62491 216 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 SRPXP78539 464 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 OR4B1Q8NGF8 309 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 COQ8AQ8NI60 647 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 C1QTNF4Q9BXJ3 329 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 MAGT1Q9H0U3 335 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 HRH4Q9H3N8 390 aa8.63□□□□□ -1.03
SMPD4-217ENST00000473720 WRBO00258 174 aa8.62□□□□□ -1.03
SMPD4-217ENST00000473720 HOXB5P09067 269 aa8.62□□□□□ -1.03
SMPD4-217ENST00000473720 AP3S2P59780 193 aa8.62□□□□□ -1.03
SMPD4-217ENST00000473720 TMEM128Q5BJH2 165 aa8.62□□□□□ -1.03
SMPD4-217ENST00000473720 SOSTQ9BQB4 213 aa8.62□□□□□ -1.03
SMPD4-217ENST00000473720 WDR12Q9GZL7 423 aaKnown RBP8.62□□□□□ -1.03
SMPD4-217ENST00000473720 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
SMPD4-217ENST00000473720 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 SNRPGP15A8MWD9 76 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 FABP1P07148 127 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 GPX4P36969 197 aaPredicted RBP8.61□□□□□ -1.03
SMPD4-217ENST00000473720 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
SMPD4-217ENST00000473720 ID1P41134 155 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 NKX2-1P43699 371 aaPredicted RBP8.61□□□□□ -1.03
SMPD4-217ENST00000473720 TCTAP57738 103 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 C12orf74Q32Q52 190 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 OR8G2PQ6IF36 304 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 OR8I2Q8N0Y5 310 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 SLC25A22Q9H936 323 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
SMPD4-217ENST00000473720 DUXBA0A1W2PPF3 345 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 F6UB75 175 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 H3BP45 60 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 MED6O75586 246 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 S100A5P33763 92 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 PPP1R1AQ13522 171 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 SPANXN5Q5MJ07 72 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 TRIM63Q969Q1 353 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 SCRT1Q9BWW7 348 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 SLC35B3Q9H1N7 401 aa8.6□□□□□ -1.03
SMPD4-217ENST00000473720 SAV1Q9H4B6 383 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-217ENST00000473720 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
SMPD4-217ENST00000473720 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
SMPD4-217ENST00000473720 PIGBOS1A0A0B4J2F0 54 aa8.59□□□□□ -1.03
SMPD4-217ENST00000473720 SYNGR2O43760 224 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms