RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CIB3Q96Q77 187 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-207ENST00000468267 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
SSBP1-207ENST00000468267 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.4
SSBP1-207ENST00000468267 LCE6AA0A183 80 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 HELTA6NFD8 242 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 MPTX1A8MV57 137 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 SYNGR2O43760 224 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 IL7P13232 177 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
SSBP1-207ENST00000468267 LEMD1Q68G75 181 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 SLC35E1Q96K37 410 aa12.57□□□□□ -0.4
SSBP1-207ENST00000468267 IGKV1D-37A0A075B6S9 117 aa12.56□□□□□ -0.4
SSBP1-207ENST00000468267 A0A0J9YWU9 116 aa12.56□□□□□ -0.4
SSBP1-207ENST00000468267 OR4E1P0C645 316 aa12.56□□□□□ -0.4
SSBP1-207ENST00000468267 AP2S1P53680 142 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-207ENST00000468267 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
SSBP1-207ENST00000468267 DHRS2Q13268 280 aa12.56□□□□□ -0.4
SSBP1-207ENST00000468267 LYG2Q86SG7 212 aa12.56□□□□□ -0.4
SSBP1-207ENST00000468267 OR51G1Q8NGK1 321 aa12.56□□□□□ -0.4
SSBP1-207ENST00000468267 ZFP92A6NM28 416 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 WRBO00258 174 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 BUB3O43684 328 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 ADAP1O75689 374 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 ZNF90Q03938 601 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 GATAD1Q8WUU5 269 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 RNF125Q96EQ8 232 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 PAIP2BQ9ULR5 123 aaKnown RBP12.55□□□□□ -0.4
SSBP1-207ENST00000468267 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
SSBP1-207ENST00000468267 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
SSBP1-207ENST00000468267 ANXA7P20073 488 aaKnown RBP12.54□□□□□ -0.4
SSBP1-207ENST00000468267 ID3Q02535 119 aa12.54□□□□□ -0.4
SSBP1-207ENST00000468267 CNPY1Q3B7I2 92 aa12.54□□□□□ -0.4
SSBP1-207ENST00000468267 STHQ8IWL8 128 aa12.54□□□□□ -0.4
SSBP1-207ENST00000468267 PRSS46E5RG02 174 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 PLA2G10O15496 165 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 IFNA21P01568 189 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 FABP1P07148 127 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 ATF4P18848 351 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-207ENST00000468267 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSBP1-207ENST00000468267 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 OR8G2PQ6IF36 304 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 THAP8Q8NA92 274 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 TRGV9Q99603 122 aa12.53□□□□□ -0.4
SSBP1-207ENST00000468267 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 SNRPGP15A8MWD9 76 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 CA1P00915 261 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-207ENST00000468267 NUP62P37198 522 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-207ENST00000468267 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 PBDC1Q9BVG4 233 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.41
SSBP1-207ENST00000468267 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.41
SSBP1-207ENST00000468267 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
SSBP1-207ENST00000468267 LYRM1O43325 122 aa12.51□□□□□ -0.41
SSBP1-207ENST00000468267 NKX2-1P43699 371 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-207ENST00000468267 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSBP1-207ENST00000468267 OR2F1Q13607 317 aa12.51□□□□□ -0.41
SSBP1-207ENST00000468267 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
SSBP1-207ENST00000468267 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
SSBP1-207ENST00000468267 RARRES2Q99969 163 aa12.51□□□□□ -0.41
SSBP1-207ENST00000468267 SEPSECSQ9HD40 501 aaKnown RBP12.51□□□□□ -0.41
SSBP1-207ENST00000468267 H3BP45 60 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 LYZP61626 148 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 PSMG4Q5JS54 123 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 TMEM217Q8N7C4 229 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 MITD1Q8WV92 249 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 RAB40CQ96S21 281 aa12.5□□□□□ -0.41
SSBP1-207ENST00000468267 HYDINQ4G0P3 5121 aa12.49□□□□□ -0.41
SSBP1-207ENST00000468267 CFDP00746 253 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-207ENST00000468267 GIG44P09565 113 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-207ENST00000468267 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
SSBP1-207ENST00000468267 ACTL10Q5JWF8 245 aa12.49□□□□□ -0.41
SSBP1-207ENST00000468267 C1orf194Q5T5A4 169 aa12.49□□□□□ -0.41
SSBP1-207ENST00000468267 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-207ENST00000468267 SMIM8Q96KF7 97 aa12.49□□□□□ -0.41
SSBP1-207ENST00000468267 C20orf85Q9H1P6 137 aa12.49□□□□□ -0.41
SSBP1-207ENST00000468267 PSENENQ9NZ42 101 aa12.49□□□□□ -0.41
SSBP1-207ENST00000468267 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 SSSCA1O60232 199 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 JTBO76095 146 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 TCRBP04435 133 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 SPP1P10451 314 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-207ENST00000468267 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
SSBP1-207ENST00000468267 PAX9P55771 341 aa12.47□□□□□ -0.41
SSBP1-207ENST00000468267 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
SSBP1-207ENST00000468267 ACOT7LQ6ZUV0 252 aa12.47□□□□□ -0.41
SSBP1-207ENST00000468267 ZBTB8BQ8NAP8 495 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-207ENST00000468267 TRAV6A0A075B6T7 132 aa12.46□□□□□ -0.41
SSBP1-207ENST00000468267 PMS2P5A8MQ11 134 aa12.46□□□□□ -0.41
SSBP1-207ENST00000468267 AKR1C1Q04828 323 aa12.46□□□□□ -0.41
SSBP1-207ENST00000468267 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.41
SSBP1-207ENST00000468267 PPP1R14BQ96C90 147 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms