RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 IGHV3-48P01763 117 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 CSN3P07498 182 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 COL8A1P27658 744 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 GUSBP1Q15486 140 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 FAM201AQ5SY85 155 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 TDHQ8IZJ6 230 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 TNCP24821 2201 aa11.05□□□□□ -0.64
PTPRE-204ENST00000455661 CSN1S1P47710 185 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 FLYWCH2Q96CP2 140 aaKnown RBP11.04□□□□□ -0.64
PTPRE-204ENST00000455661 FRYQ5TBA9 3013 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 A6NDN8 102 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 PPIAL4DF5H284 164 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 TCRAP04437 139 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 DUX4L9Q6RFH8 374 aaPredicted RBP11.04□□□□□ -0.64
PTPRE-204ENST00000455661 C2orf91Q6ZV80 131 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 ZCCHC24Q8N2G6 241 aaKnown RBP11.04□□□□□ -0.64
PTPRE-204ENST00000455661 OR4A5Q8NH83 315 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 FAM222BQ8WU58 562 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 LINC00574Q9H8X3 128 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 AP5S1Q9NUS5 200 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 RNF7Q9UBF6 113 aa11.04□□□□□ -0.64
PTPRE-204ENST00000455661 M0R296 226 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
PTPRE-204ENST00000455661 S100A7P31151 101 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 WT1-ASQ06250 92 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 ZNF833PQ6ZTB9 187 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 FER1L6-AS1Q8NA97 138 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 MRPL20Q9BYC9 149 aaKnown RBP11.03□□□□□ -0.64
PTPRE-204ENST00000455661 E7EUB6 86 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 H3BRM9 83 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 SNAI2O43623 268 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 FA2HQ7L5A8 372 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 DEFB108BQ8NET1 73 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 OR10AG1Q8NH19 301 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 TMEM167AQ8TBQ9 72 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 NEU4Q8WWR8 484 aaPredicted RBP11.03□□□□□ -0.64
PTPRE-204ENST00000455661 ZNF747Q9BV97 191 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 Q9H3A6 140 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 ZNRD1Q9P1U0 126 aa11.03□□□□□ -0.64
PTPRE-204ENST00000455661 MED13Q9UHV7 2174 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 C9orf118A6NHY6 69 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 NPIPB6E9PJ23 425 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 MSMPQ1L6U9 139 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 C9orf106Q8NAJ2 232 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 OR5AN1Q8NGI8 311 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 PRSS3P2Q8NHM4 247 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 GAFA1Q96PS6 74 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 CCL13Q99616 98 aa11.02□□□□□ -0.64
PTPRE-204ENST00000455661 hADV38S2A0JD32 116 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 TMEM238C9JI98 176 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 UQCRFS1P47985 274 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 RIGQ13278 110 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 VHLLQ6RSH7 139 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 BHLHA15Q7RTS1 189 aaPredicted RBP11.02□□□□□ -0.65
PTPRE-204ENST00000455661 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 DPF1Q92782 380 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 SARAFQ96BY9 339 aa11.02□□□□□ -0.65
PTPRE-204ENST00000455661 COL27A1Q8IZC6 1860 aaPredicted RBP11.02□□□□□ -0.65
PTPRE-204ENST00000455661 TANC2Q9HCD6 1990 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 SAP30O75446 220 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 FAM87AP0C7U9 286 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 UFSP1Q6NVU6 142 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 OR10X1Q8NGY0 326 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 PLSCR4Q9NRQ2 329 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 MRPL36Q9P0J6 103 aaKnown RBP11.01□□□□□ -0.65
PTPRE-204ENST00000455661 HEATR1Q9H583 2144 aaKnown RBP11.01□□□□□ -0.65
PTPRE-204ENST00000455661 DSCAML1Q8TD84 2053 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 IGHG3P01860 377 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 PAX2Q02962 417 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 Q86TA4 180 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
PTPRE-204ENST00000455661 PCNX2A6NKB5 2137 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 HES3Q5TGS1 186 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 LHFPL4Q7Z7J7 247 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 FAM216BQ8N7L0 139 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 TRGV9Q99603 122 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 PROCRQ9UNN8 238 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 CGB1A6NKQ9 187 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 G3V4G9 280 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 H3BTX0 84 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 GP9P14770 177 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 GATA4P43694 442 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 C10orf55Q5SWW7 151 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 PRNTQ86SH4 94 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 CIARTQ8N365 385 aaPredicted RBP11□□□□□ -0.65
PTPRE-204ENST00000455661 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
PTPRE-204ENST00000455661 DKK4Q9UBT3 224 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 RABAC1Q9UI14 185 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 LINC00312Q9Y6C7 94 aa11□□□□□ -0.65
PTPRE-204ENST00000455661 DSCAMO60469 2012 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 A0A1B0GW15 77 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 PRR33A8MZF0 331 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms