RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 RNF125Q96EQ8 232 aa13.44□□□□□ -0.26
AC004540.1-201ENST00000439120 SLC35E1Q96K37 410 aa13.44□□□□□ -0.26
AC004540.1-201ENST00000439120 SOSTQ9BQB4 213 aa13.44□□□□□ -0.26
AC004540.1-201ENST00000439120 PBDC1Q9BVG4 233 aa13.44□□□□□ -0.26
AC004540.1-201ENST00000439120 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
AC004540.1-201ENST00000439120 CCDC160A6NGH7 325 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 FABP1P07148 127 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 C4BPBP20851 252 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 VAMP1P23763 118 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 NUTF2P61970 127 aaKnown RBP13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 LGALS9CQ6DKI2 356 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 Q8NAQ8 132 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
AC004540.1-201ENST00000439120 IGHV4-28A0A0C4DH34 117 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 BUB3O43684 328 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 S100A5P33763 92 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 RAB11AP62491 216 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 TMEM128Q5BJH2 165 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 C1QTNF4Q9BXJ3 329 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 CLEC5AQ9NY25 188 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 TBC1D24Q9ULP9 559 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 AGRNO00468 2067 aa13.42□□□□□ -0.26
AC004540.1-201ENST00000439120 C11orf94C9JXX5 98 aa13.41□□□□□ -0.26
AC004540.1-201ENST00000439120 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
AC004540.1-201ENST00000439120 HRH4Q9H3N8 390 aa13.41□□□□□ -0.26
AC004540.1-201ENST00000439120 SEPSECSQ9HD40 501 aaKnown RBP13.41□□□□□ -0.26
AC004540.1-201ENST00000439120 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 IAPPP10997 89 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 TCTAP57738 103 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 GAMTQ14353 236 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 OR8G2PQ6IF36 304 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 RPP25LQ8N5L8 163 aaKnown RBP13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 PPP1R14BQ96C90 147 aa13.4□□□□□ -0.26
AC004540.1-201ENST00000439120 ZNF705EA8MWA4 302 aaPredicted RBP13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 IGLL5B9A064 214 aa13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 MED6O75586 246 aa13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 DEDDO75618 318 aa13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 RBMY1A1P0DJD3 496 aaKnown RBP13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 RBMY1CP0DJD4 496 aa13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 LYZP61626 148 aa13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 ZNF90Q03938 601 aa13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 RBMY1FQ15415 496 aaKnown RBP13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 SLC25A21Q9BQT8 299 aaPredicted RBP13.39□□□□□ -0.27
AC004540.1-201ENST00000439120 SNRPGP15A8MWD9 76 aa13.38□□□□□ -0.27
AC004540.1-201ENST00000439120 HLA-DMBP28068 263 aa13.38□□□□□ -0.27
AC004540.1-201ENST00000439120 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
AC004540.1-201ENST00000439120 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
AC004540.1-201ENST00000439120 V9GYH0 126 aa13.38□□□□□ -0.27
AC004540.1-201ENST00000439120 X6R8D5 127 aa13.38□□□□□ -0.27
AC004540.1-201ENST00000439120 SLC25A6P12236 298 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 ID1P41134 155 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 OR2F1Q13607 317 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 CSNK1G2-AS1Q8NCQ2 148 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 COQ8AQ8NI60 647 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 DEDD2Q8WXF8 326 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 LINC00052Q96N35 136 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 CIB3Q96Q77 187 aaPredicted RBP13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 XCL2Q9UBD3 114 aa13.37□□□□□ -0.27
AC004540.1-201ENST00000439120 IGKV1D-37A0A075B6S9 117 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 TRAV10A0A0B4J240 114 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 H3BMM0 161 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 PITX3O75364 302 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 HLA-DRB4P13762 266 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 NKX2-1P43699 371 aaPredicted RBP13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 LRTM2Q8N967 370 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 HLA-DRB4X5D2U9 266 aa13.36□□□□□ -0.27
AC004540.1-201ENST00000439120 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 SFT2D2O95562 160 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 HOXB5P09067 269 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 INPP1P49441 399 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 PPP1R1AQ13522 171 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 ZNF79Q15937 498 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 Q6ZTC4 211 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 OR8I2Q8N0Y5 310 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 TRGV9Q99603 122 aa13.35□□□□□ -0.27
AC004540.1-201ENST00000439120 WRBO00258 174 aa13.34□□□□□ -0.27
AC004540.1-201ENST00000439120 SYNGR2O43760 224 aa13.34□□□□□ -0.27
AC004540.1-201ENST00000439120 IGKV3-20P01619 116 aa13.34□□□□□ -0.27
AC004540.1-201ENST00000439120 PSMB3P49720 205 aa13.34□□□□□ -0.27
AC004540.1-201ENST00000439120 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
AC004540.1-201ENST00000439120 MAGT1Q9H0U3 335 aa13.34□□□□□ -0.27
AC004540.1-201ENST00000439120 CFDP00746 253 aaPredicted RBP13.33□□□□□ -0.28
AC004540.1-201ENST00000439120 SAMD13Q5VXD3 122 aa13.33□□□□□ -0.28
AC004540.1-201ENST00000439120 GGNBP1Q5YKI7 109 aa13.33□□□□□ -0.28
AC004540.1-201ENST00000439120 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
AC004540.1-201ENST00000439120 CCDC190Q86UF4 302 aa13.33□□□□□ -0.28
AC004540.1-201ENST00000439120 WDR12Q9GZL7 423 aaKnown RBP13.33□□□□□ -0.28
AC004540.1-201ENST00000439120 AKR1C1Q04828 323 aa13.32□□□□□ -0.28
AC004540.1-201ENST00000439120 SPANXN5Q5MJ07 72 aa13.32□□□□□ -0.28
AC004540.1-201ENST00000439120 THAP8Q8NA92 274 aa13.32□□□□□ -0.28
AC004540.1-201ENST00000439120 OR4B1Q8NGF8 309 aa13.32□□□□□ -0.28
AC004540.1-201ENST00000439120 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
AC004540.1-201ENST00000439120 APLNQ9ULZ1 77 aa13.32□□□□□ -0.28
AC004540.1-201ENST00000439120 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms