RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 VCYO14598 125 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 IGHG3P01860 377 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 PMVKQ15126 192 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 GAGE12JA6NER3 117 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 GAGE1Q13065 139 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 GAGE4Q13068 117 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 GAGE5Q13069 117 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 GAGE6Q13070 117 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 NEGR1Q7Z3B1 354 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 IMMP1LQ96LU5 166 aa11.54□□□□□ -0.56
RERE-204ENST00000400908 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
RERE-204ENST00000400908 CHD5Q8TDI0 1954 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 UPK2O00526 184 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 MMP23AO75900 390 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 HAPLN4Q86UW8 402 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 RNF222A6NCQ9 220 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 LTBRP36941 435 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 SS18Q15532 418 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 FAM181AQ8N9Y4 354 aa11.53□□□□□ -0.56
RERE-204ENST00000400908 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
RERE-204ENST00000400908 SP9P0CG40 484 aa11.52□□□□□ -0.56
RERE-204ENST00000400908 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.56
RERE-204ENST00000400908 CELA2AP08217 269 aa11.52□□□□□ -0.56
RERE-204ENST00000400908 COLCA1Q6ZS62 124 aa11.52□□□□□ -0.56
RERE-204ENST00000400908 NEU4Q8WWR8 484 aaPredicted RBP11.52□□□□□ -0.56
RERE-204ENST00000400908 UNC13CQ8NB66 2214 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 TM2D1Q9BX74 207 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 PRSS22Q9GZN4 317 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 LOC102723996A0A087X1L8 192 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 IGHV3-73A0A0B4J1V6 119 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 SVIPQ8NHG7 77 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 ZNF362Q5T0B9 420 aaPredicted RBP11.52□□□□□ -0.57
RERE-204ENST00000400908 FHL5Q5TD97 284 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 SIGLEC15Q6ZMC9 328 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 PPDPFLQ8WWR9 84 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 RTBDNQ9BSG5 229 aaPredicted RBP11.52□□□□□ -0.57
RERE-204ENST00000400908 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.57
RERE-204ENST00000400908 A0A1W2PR77 199 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 SEC16AO15027 2179 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 TDRD6O60522 2096 aaKnown RBP11.51□□□□□ -0.57
RERE-204ENST00000400908 PTPRZ1P23471 2315 aaPredicted RBP11.51□□□□□ -0.57
RERE-204ENST00000400908 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 LY6G5BQ8NDX9 201 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 WFDC12Q8WWY7 111 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
RERE-204ENST00000400908 IGFBP3P17936 291 aaPredicted RBP11.51□□□□□ -0.57
RERE-204ENST00000400908 ZNF474Q6S9Z5 364 aaPredicted RBP11.51□□□□□ -0.57
RERE-204ENST00000400908 FAM216BQ8N7L0 139 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 SAP25Q8TEE9 199 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
RERE-204ENST00000400908 MAP1BP46821 2468 aaKnown RBP11.51□□□□□ -0.57
RERE-204ENST00000400908 TRAV25A0A0B4J276 109 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 C15orf61A6NNL5 157 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 PRDM6Q9NQX0 595 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
RERE-204ENST00000400908 IGHMP01871 453 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 NABP1Q96AH0 204 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 SRXN1Q9BYN0 137 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 LINC00312Q9Y6C7 94 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 CKAP5Q14008 2032 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 TCF15Q12870 199 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 TRGV1A0A0A0MS02 117 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 CHKB-CPT1BH3BT56 60 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 CTHRC1Q96CG8 243 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 THSD7BQ9C0I4 1608 aa11.5□□□□□ -0.57
RERE-204ENST00000400908 NDUFS5O43920 106 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 LILRA1O75019 489 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 CD5P06127 495 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 TIMP3P35625 211 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 SRSF3P84103 164 aaKnown RBP11.49□□□□□ -0.57
RERE-204ENST00000400908 DEPPQ9NTK1 212 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 FAM168AQ92567 244 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 SPXQ9BT56 116 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 ANKRD36A6QL64 1941 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 SYS1-DBNDD2H3BUS1 97 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 EFNB3Q15768 340 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 LINC01560Q8TB33 94 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 ATP6V0BQ99437 205 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 CSTL1Q9H114 145 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 WDR81Q562E7 1941 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 TCRAP04437 139 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 PAX8Q06710 450 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 NRN1LQ496H8 165 aa11.49□□□□□ -0.57
RERE-204ENST00000400908 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
RERE-204ENST00000400908 FAM90A9PA6NNJ1 464 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 LYZL1Q6UWQ5 148 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 C18orf12Q96KH6 178 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 IFI6P09912 130 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 C3orf79P0CE67 100 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 FAM90A1Q86YD7 464 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 DSCR8Q96T75 97 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 FXYD7P58549 80 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 TMEM158Q8WZ71 300 aa11.48□□□□□ -0.57
RERE-204ENST00000400908 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms