RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 IGKV2-40A0A087WW87 121 aaPredicted RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 A0A087X0T9 212 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 C7orf71A4D174 169 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 TMEM238C9JI98 176 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 OR1I1O60431 355 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 IGKV2D-40P01614 121 aaPredicted RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 C1QBP02746 253 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 RNASE4P34096 147 aaKnown RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 SRP14P37108 136 aaKnown RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 GNG10P50151 68 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 NCALDP61601 193 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 EIF5AP63241 154 aaKnown RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 RPL19P84098 196 aaKnown RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 TSNQ15631 228 aaKnown RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 BRMS1LQ5PSV4 323 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 OR4C6Q8NH72 309 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 OR10J5Q8NHC4 309 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 SERPINI1Q99574 410 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 HOPXQ9BPY8 73 aaPredicted RBP0.78□□□□□ -2.28
CD47-203ENST00000398258 REG4Q9BYZ8 158 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 COL6A6A6NMZ7 2263 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 FMN1Q68DA7 1419 aa0.78□□□□□ -2.28
CD47-203ENST00000398258 ADGRB2O60241 1585 aa0.78□□□□□ -2.29
CD47-203ENST00000398258 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 FLG2Q5D862 2391 aaPredicted RBP0.77□□□□□ -2.29
CD47-203ENST00000398258 G3V2T6 193 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 TAX1BP3O14907 124 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 BANF1O75531 89 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 LYZL6O75951 148 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 ATG12O94817 140 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 UBL3O95164 117 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 NDUFC2O95298 119 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 SSR2P43308 183 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 TAS2R41P59536 307 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 RHOGP84095 191 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 KRR1Q13601 381 aaKnown RBP0.77□□□□□ -2.29
CD47-203ENST00000398258 SURF2Q15527 256 aaPredicted RBP0.77□□□□□ -2.29
CD47-203ENST00000398258 SNCBQ16143 134 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 RRN3P1Q2M238 152 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 TMED4Q7Z7H5 227 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 SMIM20Q8N5G0 67 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 LINC00311Q8N616 119 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 SLAMF6Q96DU3 332 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 PRADC1Q9BSG0 188 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 TRABDQ9H4I3 376 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 BCL2L10Q9HD36 194 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 PRNDQ9UKY0 176 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 PYCARDQ9ULZ3 195 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 SLC35A3Q9Y2D2 325 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 TEX14Q8IWB6 1497 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 CC2D2AQ9P2K1 1620 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 SBF1O95248 1867 aa0.77□□□□□ -2.29
CD47-203ENST00000398258 RP1P56715 2156 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 INTS1Q8N201 2190 aaKnown RBP0.76□□□□□ -2.29
CD47-203ENST00000398258 ZNF106Q9H2Y7 1883 aaKnown RBP0.76□□□□□ -2.29
CD47-203ENST00000398258 KDM6BO15054 1643 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 CCDC180Q9P1Z9 1646 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 CEP164Q9UPV0 1460 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 EIF3AQ14152 1382 aaKnown RBP0.76□□□□□ -2.29
CD47-203ENST00000398258 LOC110117498A0A087WWA1 95 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 TRAV12-1A0A0B4J245 112 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 H7C1C5 153 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 PIAS1O75925 651 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 GADD45GO95257 159 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 IFNA1P01562 189 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 IFNA7P01567 189 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 IL9P15248 144 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 S100A5P33763 92 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 PHBP35232 272 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 RAB4BP61018 213 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 LCN6P62502 163 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 DYNLT1P63172 113 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 ESRGQ1W209 222 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 DEFB113Q30KQ7 82 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 AKR1C8PQ5T2L2 129 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 SOSTDC1Q6X4U4 206 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 LYG2Q86SG7 212 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 C3orf56Q8N813 242 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 SLC30A7Q8NEW0 376 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 OR13C6PQ8NH95 151 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 NEK7Q8TDX7 302 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 C6orf62Q9GZU0 229 aaPredicted RBP0.76□□□□□ -2.29
CD47-203ENST00000398258 PCTPQ9UKL6 214 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 UFC1Q9Y3C8 167 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 CACNA1BQ00975 2339 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 ALPK2Q86TB3 2170 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 DOCK3Q8IZD9 2030 aa0.76□□□□□ -2.29
CD47-203ENST00000398258 MRC2Q9UBG0 1479 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 M0R2N4 97 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 M0R378 163 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 MFSD11O43934 449 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 NFYBP25208 207 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 BRS3P32247 399 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 ZNF93P35789 620 aaPredicted RBP0.75□□□□□ -2.29
CD47-203ENST00000398258 VBP1P61758 197 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 GNG3P63215 75 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 PLCXD2Q0VAA5 305 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 BCL2L15Q5TBC7 163 aa0.75□□□□□ -2.29
CD47-203ENST00000398258 PDZD9Q8IXQ8 264 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms