RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 GLTPQ9NZD2 209 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 MED12LQ86YW9 2145 aa0.26□□□□□ -2.37
RNU6-440P-201ENST00000390882 NOTCH1P46531 2555 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 DIDO1Q9BTC0 2240 aaKnown RBP0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 CCDC144AA2RUR9 1427 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 FMN1Q68DA7 1419 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 TRBV6-4A0A1B0GX49 114 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 A0A1W2PPM0 123 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 PDE6DO43924 150 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 GADD45GO95257 159 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 DNAL4O96015 105 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 TCRBP04435 133 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 SMIM17P0DL12 118 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 LSM6P62312 80 aaKnown RBP0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 AESQ08117 197 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 RGS21Q2M5E4 152 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 TMEM97Q5BJF2 176 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 LYRM7Q5U5X0 104 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 Q6Q795 121 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 KRTAP19-3Q7Z4W3 81 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 SBSPONQ8IVN8 264 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 CLECL1Q8IZS7 167 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 PLPP5Q8NEB5 264 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 SLC30A7Q8NEW0 376 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 OR52L1Q8NGH7 329 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 SLC25A40Q8TBP6 338 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 PPP1R14BQ96C90 147 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 SLAMF6Q96DU3 332 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 TMEM70Q9BUB7 260 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 C14orf105Q9NVL8 296 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 TVP23BQ9NYZ1 205 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 IDI2-AS1Q9NZ38 188 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 FBXO5Q9UKT4 447 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 UTP11Q9Y3A2 253 aaKnown RBP0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 PRELID3BQ9Y3B1 194 aa0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 TNRC6AQ8NDV7 1962 aaKnown RBP0.25□□□□□ -2.37
RNU6-440P-201ENST00000390882 FBN2P35556 2912 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 PHRF1Q9P1Y6 1649 aaKnown RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 ARHGEF11O15085 1522 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 RP1P56715 2156 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 A0A087WUJ7 227 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 TRAV4A0A0B4J268 109 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 TMEM114B3SHH9 223 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 CCL25O15444 150 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 TIMM17BO60830 172 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 HAND1O96004 215 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 DHFRP00374 187 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 RNASE4P34096 147 aaKnown RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 SRP14P37108 136 aaKnown RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 DYNLT1P63172 113 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 EIF5AP63241 154 aaKnown RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 PSG9Q00887 426 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 SRSF6Q13247 344 aaKnown RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 C2orf82Q6UX34 121 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 LINC00322Q6ZN03 302 aaPredicted RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 ST6GALNAC3Q8NDV1 305 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 YPEL2Q96QA6 119 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 GPER1Q99527 375 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 PRADC1Q9BSG0 188 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 RNASE7Q9H1E1 156 aaKnown RBP0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 TLNRD1Q9H1K6 362 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 TMEM133Q9H2Q1 129 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 UQCC1Q9NVA1 299 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 TMEM14CQ9P0S9 112 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 OBSL1O75147 1896 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 UBR2Q8IWV8 1755 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 CAMSAP1Q5T5Y3 1602 aa0.24□□□□□ -2.37
RNU6-440P-201ENST00000390882 NCOA6Q14686 2063 aaPredicted RBP0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 NCAPD3P42695 1498 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 MYH7BA7E2Y1 1941 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 ALPK3Q96L96 1907 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 TRGV10A0A0A0MS01 117 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 CCL16O15467 120 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 NDUFB3O43676 98 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 ERP29P30040 261 aaKnown RBP0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 SRIP30626 198 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 CDKN2CP42773 168 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 EFNA4P52798 201 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 PIGPP57054 158 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 DEFA3P59666 94 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 CCL7P80098 99 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 ITGB3BPQ13352 177 aaPredicted RBP0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 KRR1Q13601 381 aaKnown RBP0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 BCL2L15Q5TBC7 163 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 C4orf22Q6V702 233 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 GKN2Q86XP6 184 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 GNPDA2Q8TDQ7 276 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 BTF3L4Q96K17 158 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 LINC00052Q96N35 136 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 TP53RKQ96S44 253 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 KIFC1Q9BW19 673 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 ORMDL1Q9P0S3 153 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 SLC22A13Q9Y226 551 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 CHCHD2Q9Y6H1 151 aaPredicted RBP0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 PCF11O94913 1555 aaKnown RBP0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 MYLKQ15746 1914 aa0.23□□□□□ -2.37
RNU6-440P-201ENST00000390882 CECR2Q9BXF3 1484 aa0.22□□□□□ -2.37
RNU6-440P-201ENST00000390882 PLXNA4Q9HCM2 1894 aa0.22□□□□□ -2.37
RNU6-440P-201ENST00000390882 ZFYVE9O95405 1425 aa0.22□□□□□ -2.37
RNU6-440P-201ENST00000390882 SIP14410 1827 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms