RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 OR10W1Q8NGF6 305 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 OR4A5Q8NH83 315 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 MYOZ3Q8TDC0 251 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 C4orf3Q8WVX3 66 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 S100ZQ8WXG8 99 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 SEC22AQ96IW7 307 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 OR4F4Q96R69 305 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 SPIN2AQ99865 258 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 SPIN2BQ9BPZ2 258 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 COMMD5Q9GZQ3 224 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 TMEM222Q9H0R3 208 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 PARLQ9H300 379 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 GPN1Q9HCN4 374 aaPredicted RBP3.29□□□□□ -1.88
PMS1-202ENST00000374826 GSN-AS1Q9NRJ2 163 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 FAM212BQ9NTI7 297 aaPredicted RBP3.29□□□□□ -1.88
PMS1-202ENST00000374826 GPR132Q9UNW8 380 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 FLVCR2Q9UPI3 526 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 OR51B2Q9Y5P1 312 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 S4R3C0 116 aa3.29□□□□□ -1.88
PMS1-202ENST00000374826 TRAV6A0A075B6T7 132 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 TEX50A0A1B0GTY4 177 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 C13orf42A0A1B0GVH6 325 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 NAP1L6A6NFF2 107 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 CENPXA8MT69 81 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 H3BUA1 57 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 CCL24O00175 119 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 PLA2G10O15496 165 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 ST8SIA3O43173 380 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 LYRM1O43325 122 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 UPK1BO75841 260 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 OR2J3O76001 311 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 NDUFB6O95139 128 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 TRBV12-3P01733 135 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 IGHV3-23P01764 117 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 LGALS1P09382 135 aaKnown RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 TRAPPC2P0DI81 140 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 TRAPPC2BP0DI82 140 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 PSMB6P28072 239 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 CDX1P47902 265 aaPredicted RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 RHOGP84095 191 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
PMS1-202ENST00000374826 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 EXOSC2Q13868 293 aaKnown RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 KIAA0141Q14154 515 aaPredicted RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 ZNF846Q147U1 533 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 OPCMLQ14982 345 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 SGPP2Q8IWX5 399 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 SELENOHQ8IZQ5 122 aaKnown RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 SLC35G3Q8N808 338 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 OR11H1Q8NG94 326 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 OR1L8Q8NGR8 309 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 OR4A16Q8NH70 328 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 GLYATL2Q8WU03 294 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 DEDD2Q8WXF8 326 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 RBPMSQ93062 196 aaKnown RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 GALNT14Q96FL9 552 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 UBE2E2Q96LR5 201 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 SCGB3A2Q96PL1 93 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 SLC25A21Q9BQT8 299 aaPredicted RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 C7orf50Q9BRJ6 194 aaKnown RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 CCDC32Q9BV29 185 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 C20orf85Q9H1P6 137 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 TMEM14BQ9NUH8 114 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 PRNDQ9UKY0 176 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 TBC1D24Q9ULP9 559 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 ZNF257Q9Y2Q1 563 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 PRKDCP78527 4128 aaKnown RBP3.28□□□□□ -1.88
PMS1-202ENST00000374826 DNAH3Q8TD57 4116 aa3.28□□□□□ -1.88
PMS1-202ENST00000374826 IGHV3-21A0A0B4J1V1 117 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 MFSD2BA6NFX1 497 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 PPP5D1E7EU14 171 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 G3V4G9 280 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 I3L521 148 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 B3GALNT1O75752 331 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 ATG12O94817 140 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 SFT2D2O95562 160 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 CDS2O95674 445 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 IFNA17P01571 189 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 HLA-AP01891 365 aaKnown RBP3.27□□□□□ -1.89
PMS1-202ENST00000374826 OR4E1P0C645 316 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 P0C879 139 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 OR13C7P0DN81 318 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 ANXA3P12429 323 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 DEFA4P12838 97 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 FOLR2P14207 255 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 IGLL1P15814 213 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 CTRB1P17538 263 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 MYCNOSP40205 109 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 MFAP2P55001 183 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 UBE2MP61081 183 aaKnown RBP3.27□□□□□ -1.89
PMS1-202ENST00000374826 PRCDQ00LT1 54 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 IFITM3Q01628 133 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 WT1-ASQ06250 92 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 CD300CQ08708 224 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 ZNF616Q08AN1 781 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 DHRS2Q13268 280 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 C15orf32Q32M92 178 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 ANKRD55Q3KP44 614 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 TMEM128Q5BJH2 165 aa3.27□□□□□ -1.89
PMS1-202ENST00000374826 CTRB2Q6GPI1 263 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms