RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 A0A1B0GW64 132 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 P01737 135 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 CLEC3BP05452 202 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 MORN5Q5VZ52 161 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 TMEM200BQ69YZ2 307 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 EXOC3-AS1Q8N2X6 119 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 ADTRPQ96IZ2 230 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 TRBV24-1A0A075B6N3 115 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.72□□□□□ -1.33
HPS4-201ENST00000336873 E7EUB6 86 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 OR2J3O76001 311 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 CT45A10P0DMU9 189 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 GRNP28799 593 aaKnown RBP6.72□□□□□ -1.33
HPS4-201ENST00000336873 CEACAM8P31997 349 aaPredicted RBP6.72□□□□□ -1.33
HPS4-201ENST00000336873 CDKN1AP38936 164 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 KLRD1Q13241 179 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 BEND2Q8NDZ0 799 aa6.72□□□□□ -1.33
HPS4-201ENST00000336873 PPIAL4CA0A0B4J2A2 164 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 IGHV1-69-2A0A0G2JMI3 117 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 A0A0G2JNJ9 132 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 AMY1AP04745 511 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 STAG3L2P0CL84 134 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 STAG3L3P0CL85 134 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 PPIAL4GP0DN37 164 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 LDLRAD2Q5SZI1 272 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 Q9UFV3 132 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 FAM215AQ9Y5M1 114 aa6.71□□□□□ -1.33
HPS4-201ENST00000336873 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 C15orf65H3BRN8 121 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 ISLRO14498 428 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 MPDU1O75352 247 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 PPIFP30405 207 aaKnown RBP6.71□□□□□ -1.34
HPS4-201ENST00000336873 CCKARP32238 428 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 TMEM183BQ1AE95 376 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 Q6ZS49 121 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 ZNF738Q8NE65 137 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 FOXA2Q9Y261 457 aaPredicted RBP6.71□□□□□ -1.34
HPS4-201ENST00000336873 CORTO00230 105 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 IL4P05112 153 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 NBEAP1P0C6P0 100 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 BRS3P32247 399 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 OR8A1Q8NGG7 326 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.34
HPS4-201ENST00000336873 FAM168AQ92567 244 aa6.71□□□□□ -1.34
HPS4-201ENST00000336873 LSM4Q9Y4Z0 139 aaKnown RBP6.71□□□□□ -1.34
HPS4-201ENST00000336873 BMPR1BO00238 502 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 UPK2O00526 184 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 HYPMO75409 117 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 FCER1GP30273 86 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 SRP14P37108 136 aaKnown RBP6.7□□□□□ -1.34
HPS4-201ENST00000336873 SPATA45Q537H7 98 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 SEM1Q6ZVN7 128 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 VSTM2AQ8TAG5 236 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 TMEM170AQ8WVE7 144 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 SRSF12Q8WXF0 261 aaKnown RBP6.7□□□□□ -1.34
HPS4-201ENST00000336873 RITA1Q96K30 269 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 OR8B2Q96RD0 313 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 SPRY4Q9C004 299 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 TRAV1-1A0A0B4J248 108 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 ZNF785A8K8V0 405 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 M0R3E3 92 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 KIR2DS2P43631 304 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 SCGB2A2Q13296 93 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
HPS4-201ENST00000336873 C17orf58Q2M2W7 97 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 Q6ZVH6 145 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 TIMD4Q96H15 378 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 TRBV6-6A0A0A6YYG2 114 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 GCGP01275 180 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 ORM1P02763 201 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 PRRX1P54821 245 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 LY6DQ14210 128 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 ADIPOQQ15848 244 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 SP5Q6BEB4 398 aaPredicted RBP6.7□□□□□ -1.34
HPS4-201ENST00000336873 GAFA1Q96PS6 74 aa6.7□□□□□ -1.34
HPS4-201ENST00000336873 RPUSD1Q9UJJ7 312 aaKnown RBP6.7□□□□□ -1.34
HPS4-201ENST00000336873 CHTOPQ9Y3Y2 248 aaKnown RBP6.7□□□□□ -1.34
HPS4-201ENST00000336873 DLL1O00548 723 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 TMEM144Q7Z5S9 345 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 CIARTQ8N365 385 aaPredicted RBP6.69□□□□□ -1.34
HPS4-201ENST00000336873 KCNS1Q96KK3 526 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 ELOVL5Q9NYP7 299 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 IL36BQ9NZH7 164 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 HTN1P15515 57 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 ARL3P36405 182 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 LOXL3P58215 753 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 LCN2P80188 198 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 KRTAP27-1Q3LI81 207 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 RNASE6Q93091 150 aaKnown RBP6.69□□□□□ -1.34
HPS4-201ENST00000336873 KMT2EQ8IZD2 1858 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 COMPP49747 757 aaPredicted RBP6.69□□□□□ -1.34
HPS4-201ENST00000336873 CD69Q07108 199 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 Q6ZSR3 168 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 OR52E5Q8NH55 327 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
HPS4-201ENST00000336873 BET1LQ9NYM9 111 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms