RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SEPSECSQ9HD40 501 aaKnown RBP11.06□□□□□ -0.64
DDX54-202ENST00000314045 GPX1P07203 203 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 C22orf34Q6ZV56 151 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 PGLYRP4Q96LB8 373 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 ELOVL1Q9BW60 279 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 SDF2L1Q9HCN8 221 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 KIR3DL3Q8N743 410 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 ARL2-SNX15V9GYD0 113 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 HIVEP3Q5T1R4 2406 aa11.06□□□□□ -0.64
DDX54-202ENST00000314045 IGHV1-69DA0A0B4J2H0 117 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 IGHV1-69P01742 117 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 GATA3P23771 443 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 TOMM20LQ6UXN7 152 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 TRAV1-1A0A0B4J248 108 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 C8orf46Q8TAG6 207 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 ABCA2Q9BZC7 2435 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 PLA2G5P39877 138 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 MGPP08493 103 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 TAS2R60P59551 318 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 TWIST1Q15672 202 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 TRGV9Q99603 122 aa11.05□□□□□ -0.64
DDX54-202ENST00000314045 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.04□□□□□ -0.64
DDX54-202ENST00000314045 A0A1W2PRX2 142 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 SLC17A3O00476 420 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 PF4P02776 101 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 PAX8Q06710 450 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 TNCP24821 2201 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 USP9YO00507 2555 aaPredicted RBP11.04□□□□□ -0.64
DDX54-202ENST00000314045 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 HLA-DQA1P01909 254 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 GPR82Q96P67 336 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 TNRC6AQ8NDV7 1962 aaKnown RBP11.04□□□□□ -0.64
DDX54-202ENST00000314045 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
DDX54-202ENST00000314045 CD5P06127 495 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 MEOX2P50222 304 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 RPL23P62829 140 aaKnown RBP11.03□□□□□ -0.64
DDX54-202ENST00000314045 GNG5P63218 68 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 ZNF329Q86UD4 541 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 JMJD8Q96S16 334 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 SRRM4A7MD48 611 aaKnown RBP11.03□□□□□ -0.64
DDX54-202ENST00000314045 M0R2Z0 102 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
DDX54-202ENST00000314045 IGHV2-5P01817 119 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 OTORQ9NRC9 128 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
DDX54-202ENST00000314045 IL15RAQ13261 267 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 IQCJQ1A5X6 159 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 DDB2Q92466 427 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 Q96MF0 132 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 EPDR1Q9UM22 224 aa11.03□□□□□ -0.64
DDX54-202ENST00000314045 WNK1Q9H4A3 2382 aa11.02□□□□□ -0.64
DDX54-202ENST00000314045 KIAA1644Q3SXP7 199 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.65
DDX54-202ENST00000314045 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 TSPOP30536 169 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 SRSF8Q9BRL6 282 aaKnown RBP11.02□□□□□ -0.65
DDX54-202ENST00000314045 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 TPSG1Q9NRR2 321 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 IGHV3OR16-12A0A075B7B8 117 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 PMS2P5A8MQ11 134 aa11.02□□□□□ -0.65
DDX54-202ENST00000314045 C5orf42Q9H799 3197 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 PGPEP1LA6NFU8 196 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 DAZAP2Q15038 168 aaPredicted RBP11.01□□□□□ -0.65
DDX54-202ENST00000314045 ATG101Q9BSB4 218 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 USP9XQ93008 2570 aaPredicted RBP11.01□□□□□ -0.65
DDX54-202ENST00000314045 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 GCGP01275 180 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 POU2AF1Q16633 256 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 SLC25A39Q9BZJ4 359 aaPredicted RBP11.01□□□□□ -0.65
DDX54-202ENST00000314045 MRPL18Q9H0U6 180 aaKnown RBP11.01□□□□□ -0.65
DDX54-202ENST00000314045 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 FNDC10F2Z333 226 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 RAX2Q96IS3 184 aa11.01□□□□□ -0.65
DDX54-202ENST00000314045 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
DDX54-202ENST00000314045 WT1-ASQ06250 92 aa11□□□□□ -0.65
DDX54-202ENST00000314045 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
DDX54-202ENST00000314045 JKAMPQ9P055 326 aa11□□□□□ -0.65
DDX54-202ENST00000314045 CD99P14209 185 aa11□□□□□ -0.65
DDX54-202ENST00000314045 C11orf42Q8N5U0 333 aa11□□□□□ -0.65
DDX54-202ENST00000314045 FMC1Q96HJ9 113 aa11□□□□□ -0.65
DDX54-202ENST00000314045 SLC50A1Q9BRV3 221 aa11□□□□□ -0.65
DDX54-202ENST00000314045 VAMP8Q9BV40 100 aa11□□□□□ -0.65
DDX54-202ENST00000314045 YTHDF2Q9Y5A9 579 aaKnown RBP11□□□□□ -0.65
DDX54-202ENST00000314045 EML5Q05BV3 1969 aa11□□□□□ -0.65
DDX54-202ENST00000314045 IGHV4-39P01824 125 aa11□□□□□ -0.65
DDX54-202ENST00000314045 PRSS1P07477 247 aa11□□□□□ -0.65
DDX54-202ENST00000314045 FAM209BQ5JX69 171 aa11□□□□□ -0.65
DDX54-202ENST00000314045 SPSB3Q6PJ21 355 aa11□□□□□ -0.65
DDX54-202ENST00000314045 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
DDX54-202ENST00000314045 LRRK2Q5S007 2527 aa11□□□□□ -0.65
DDX54-202ENST00000314045 IGHV4-61A0A0C4DH41 118 aa11□□□□□ -0.65
DDX54-202ENST00000314045 CKS2P33552 79 aa11□□□□□ -0.65
DDX54-202ENST00000314045 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
DDX54-202ENST00000314045 OCC1Q8TAD7 63 aa11□□□□□ -0.65
DDX54-202ENST00000314045 PARD6GQ9BYG4 376 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms